RNA–Protein interactions for RNA: ENST00000608461.1

HDDC2-206, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-206ENST00000608461 PCDHGB3Q9Y5G1 929 aa13.09□□□□□ -0.31
HDDC2-206ENST00000608461 PRSS51A0A1B0GVH4 220 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 G3V3Y1 287 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 ZNF195O14628 629 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 PRRG2O14669 202 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 LRRTM2O43300 516 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 ATP8B1O43520 1251 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 ICOSLGO75144 302 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 SEMA7AO75326 666 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 IL33O95760 270 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 ABOP16442 354 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 PTGS2P35354 604 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 MASP1P48740 699 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 CCT3P49368 545 aaKnown RBP13.08□□□□□ -0.32
HDDC2-206ENST00000608461 CDK9P50750 372 aaKnown RBP13.08□□□□□ -0.32
HDDC2-206ENST00000608461 IRX1P78414 480 aaPredicted RBP13.08□□□□□ -0.32
HDDC2-206ENST00000608461 GAB1Q13480 694 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 PGS1Q32NB8 556 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 MFSD12Q6NUT3 480 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 EPGNQ6UW88 154 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 RNF138Q8WVD3 245 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 CKAP2Q8WWK9 683 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 STON2Q8WXE9 905 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 ADOQ96SZ5 270 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 STACQ99469 402 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 OSBPL11Q9BXB4 747 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 WDR55Q9H6Y2 383 aaPredicted RBP13.08□□□□□ -0.32
HDDC2-206ENST00000608461 DUSP22Q9NRW4 184 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 ZCCHC3Q9NUD5 404 aaKnown RBP13.08□□□□□ -0.32
HDDC2-206ENST00000608461 FAM120CQ9NX05 1096 aaKnown RBP13.08□□□□□ -0.32
HDDC2-206ENST00000608461 KLRF1Q9NZS2 232 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 ERRFI1Q9UJM3 462 aaPredicted RBP13.08□□□□□ -0.32
HDDC2-206ENST00000608461 ABCG2Q9UNQ0 655 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 GPR45Q9Y5Y3 372 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 USH1CQ9Y6N9 552 aa13.08□□□□□ -0.32
HDDC2-206ENST00000608461 HIVEP3Q5T1R4 2406 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 PRAMEF25A6NGN4 478 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 LRRC3CA6NJW4 275 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 FAM166BA8MTA8 275 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 E9PBE3 544 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 AQP7O14520 342 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 CFLARO15519 480 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 CBR3O75828 277 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 ALOX5P09917 674 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 ALDOCP09972 364 aaKnown RBP13.07□□□□□ -0.32
HDDC2-206ENST00000608461 MAGEA5P43359 124 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 CLK3P49761 638 aaKnown RBP13.07□□□□□ -0.32
HDDC2-206ENST00000608461 PRKAG1P54619 331 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 PDCD4Q53EL6 469 aaKnown RBP13.07□□□□□ -0.32
HDDC2-206ENST00000608461 HSP90B2PQ58FF3 399 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 EXOSC6Q5RKV6 272 aaKnown RBP13.07□□□□□ -0.32
HDDC2-206ENST00000608461 TIGD3Q6B0B8 471 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 ACAD11Q709F0 780 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 TRILQ7L0X0 811 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 CHERPQ8IWX8 916 aaKnown RBP13.07□□□□□ -0.32
HDDC2-206ENST00000608461 ARFGAP2Q8N6H7 521 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 OR4N2Q8NGD1 307 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 OR1J4Q8NGS1 313 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 FAM57AQ8TBR7 257 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 GPR151Q8TDV0 419 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 NODALQ96S42 347 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 ZBTB18Q99592 522 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 ACTRT3Q9BYD9 372 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 DEFB127Q9H1M4 99 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 UBQLN3Q9H347 655 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 MED4Q9NPJ6 270 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 SDHAF3Q9NRP4 125 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 SUCOQ9UBS9 1254 aaKnown RBP13.07□□□□□ -0.32
HDDC2-206ENST00000608461 SNX8Q9Y5X2 465 aa13.07□□□□□ -0.32
HDDC2-206ENST00000608461 NINQ8N4C6 2090 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 TRGV8A0A0C4DH27 118 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 GOLGA8QA0A0J9YX86 632 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 A0A1B0GTH9 108 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 GOLGA8OA6NCC3 632 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 DUXAA6NLW8 204 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 GOLGA8NF8WBI6 632 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 BCKDKO14874 412 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 SNPHO15079 494 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 UBDO15205 165 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 CDC40O60508 579 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDDC2-206ENST00000608461 SCN2BO60939 215 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 WISP2O76076 250 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 C6orf47O95873 294 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 LDLRP01130 860 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 HMGN2P05204 90 aaKnown RBP13.06□□□□□ -0.32
HDDC2-206ENST00000608461 IL6P05231 212 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 HPNP05981 417 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 NGFRP08138 427 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 S100A3P33764 101 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 GABRA3P34903 492 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 PTGDSP41222 190 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 MRPL19P49406 292 aaKnown RBP13.06□□□□□ -0.32
HDDC2-206ENST00000608461 WNT3P56703 355 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 HBA1P69905 142 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 TP53BP2Q13625 1128 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.06□□□□□ -0.32
HDDC2-206ENST00000608461 SPDYE7PQ495Y7 208 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 SLC9B1Q4ZJI4 515 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 FNDC7Q5VTL7 733 aa13.06□□□□□ -0.32
HDDC2-206ENST00000608461 NXNQ6DKJ4 435 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms