RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 LINC00469Q8N7U9 141 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 EIF1ADQ8N9N8 165 aaKnown RBP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 SPERTQ8NA61 448 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 NUP37Q8NFH4 326 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 ZNF519Q8TB69 540 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 SPPL2AQ8TCT8 520 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 RAET1EQ8TD07 263 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 LHX4Q969G2 390 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 ZNF501Q96CX3 271 aaPredicted RBP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 PSKH2Q96QS6 385 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 TNFRSF13CQ96RJ3 184 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 C19orf43Q9BQ61 176 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 EDEM2Q9BV94 578 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 GPR174Q9BXC1 333 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 VCX2Q9H322 139 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 DHX33Q9H6R0 707 aaKnown RBP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 NT5DC2Q9H857 520 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 PLCXD1Q9NUJ7 323 aa4.29□□□□□ -1.72
LINC00397-202ENST00000606785 ZNF346Q9UL40 294 aaKnown RBP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 NIP7Q9Y221 180 aaKnown RBP eCLIP4.29□□□□□ -1.72
LINC00397-202ENST00000606785 KANK1Q14678 1352 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 LOC105371242A0A075B767 164 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 PPIAL4CA0A0B4J2A2 164 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 TRBV5-4A0A0C4DH59 114 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 ERVV-2B6SEH9 535 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 GOLGA6L19H0YKK7 550 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 AP3B1O00203 1094 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 RANBP6O60518 1105 aaKnown RBP4.28□□□□□ -1.72
LINC00397-202ENST00000606785 IGSF6O95976 241 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 PPIAL4GP0DN37 164 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 KRTAP10-7P60409 375 aaPredicted RBP4.28□□□□□ -1.72
LINC00397-202ENST00000606785 OSTNP61366 133 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 IL9RQ01113 521 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 BNIP1Q12981 228 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 TFDP1Q14186 410 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 PPP1R7Q15435 360 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 WDR25Q64LD2 544 aaPredicted RBP4.28□□□□□ -1.72
LINC00397-202ENST00000606785 KRTAP5-11Q6L8G4 156 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 PMF1Q6P1K2 205 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 TMEM184AQ6ZMB5 413 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 ZNF841Q6ZN19 808 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 KCNMB4Q86W47 210 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 CCDC148Q8NFR7 591 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 OR4F17Q8NGA8 305 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 OR52B6Q8NGF0 335 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 SPRYD4Q8WW59 207 aaPredicted RBP4.28□□□□□ -1.72
LINC00397-202ENST00000606785 CTNNBL1Q8WYA6 563 aaPredicted RBP4.28□□□□□ -1.72
LINC00397-202ENST00000606785 ADIPOR1Q96A54 375 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 AKR1E2Q96JD6 320 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 CNDP1Q96KN2 507 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 RCHY1Q96PM5 261 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 OR4F4Q96R69 305 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 WDR41Q9HAD4 459 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 TMEM165Q9HC07 324 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 SDF2L1Q9HCN8 221 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 TMEM181Q9P2C4 612 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 RNF14Q9UBS8 474 aa4.28□□□□□ -1.72
LINC00397-202ENST00000606785 IGHV3-38A0A0C4DH36 116 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 GSAPA4D1B5 854 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 IGLON5A6NGN9 336 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 CCDC169A6NNP5 214 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 PDLIM1O00151 329 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 TRAFD1O14545 582 aaPredicted RBP4.27□□□□□ -1.73
LINC00397-202ENST00000606785 DCXO43602 365 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 OR1F1O43749 312 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 NEBLO76041 1014 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 YEATS4O95619 227 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 ADCY5O95622 1261 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 S100A6P06703 90 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 RPSAP08865 295 aaKnown RBP4.27□□□□□ -1.73
LINC00397-202ENST00000606785 FOSL2P15408 326 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 EPS15P42566 896 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 PPT1P50897 306 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 HYAL1Q12794 435 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 PDK3Q15120 406 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 IMMTQ16891 758 aaKnown RBP4.27□□□□□ -1.73
LINC00397-202ENST00000606785 CCDC183Q5T5S1 534 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 TTC23Q5W5X9 447 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 KIAA1161Q6NSJ0 714 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 ANGPTL8Q6UXH0 198 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 MOB2Q70IA6 237 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 CARM1Q86X55 608 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 OR52K2Q8NGK3 314 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 OR13C2Q8NGS9 318 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 UPRTQ96BW1 309 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 NRBF2Q96F24 287 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 ELMO2Q96JJ3 720 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 PGLYRP2Q96PD5 576 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 SECISBP2Q96T21 854 aaKnown RBP4.27□□□□□ -1.73
LINC00397-202ENST00000606785 ZBTB18Q99592 522 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 OSBPL10Q9BXB5 764 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 TBC1D10AQ9BXI6 508 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 MEAF6Q9HAF1 191 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 DCAF13Q9NV06 445 aaKnown RBP4.27□□□□□ -1.73
LINC00397-202ENST00000606785 DUS2Q9NX74 493 aaKnown RBP4.27□□□□□ -1.73
LINC00397-202ENST00000606785 THYN1Q9P016 225 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 MRPS28Q9Y2Q9 187 aaKnown RBP4.27□□□□□ -1.73
LINC00397-202ENST00000606785 DHRS7Q9Y394 339 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 LRP12Q9Y561 859 aa4.27□□□□□ -1.73
LINC00397-202ENST00000606785 GAKO14976 1311 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms