RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 EEF1E1O43324 174 aaKnown RBP6.91□□□□□ -1.3
CUX1-219ENST00000606749 CD99P14209 185 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 DDCP20711 480 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 CHMP24386 653 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 GRK2P25098 689 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 IL12BP29460 328 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 KRT20P35900 424 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 DGKQP52824 942 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 CLDN18P56856 261 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 PSPHP78330 225 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 SORDQ00796 357 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 PSG6Q00889 435 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 ZNF763Q0D2J5 394 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 C2orf80Q0P641 193 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 EFR3AQ14156 821 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 BCL2A1Q16548 175 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 CYP27C1Q4G0S4 372 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 FAM71E1Q6IPT2 247 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 AAGABQ6PD74 315 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 SH2D5Q6ZV89 423 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 TRIM46Q7Z4K8 759 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 IFNEQ86WN2 208 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 FAM9CQ8IZT9 166 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 CCNYL1Q8N7R7 359 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 CEP112Q8N8E3 955 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 KIF18AQ8NI77 898 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 EFHD2Q96C19 240 aaPredicted RBP6.91□□□□□ -1.3
CUX1-219ENST00000606749 INTS12Q96CB8 462 aaKnown RBP6.91□□□□□ -1.3
CUX1-219ENST00000606749 CCDC126Q96EE4 140 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 ZFP3Q96NJ6 502 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 BBS4Q96RK4 519 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 TM9SF2Q99805 663 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 SFXN3Q9BWM7 321 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 RBM24Q9BX46 236 aaKnown RBP6.91□□□□□ -1.3
CUX1-219ENST00000606749 SHCBP1LQ9BZQ2 653 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 STMN4Q9H169 189 aaPredicted RBP6.91□□□□□ -1.3
CUX1-219ENST00000606749 PSMC3IPQ9P2W1 217 aaPredicted RBP6.91□□□□□ -1.3
CUX1-219ENST00000606749 CLCF1Q9UBD9 225 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 TBK1Q9UHD2 729 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 EMCNQ9ULC0 261 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 C19orf53Q9UNZ5 99 aaPredicted RBP6.91□□□□□ -1.3
CUX1-219ENST00000606749 PLEKHA6Q9Y2H5 1048 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 RPH3AQ9Y2J0 694 aaPredicted RBP6.91□□□□□ -1.3
CUX1-219ENST00000606749 WBP11Q9Y2W2 641 aaKnown RBP6.91□□□□□ -1.3
CUX1-219ENST00000606749 OR10H1Q9Y4A9 318 aa6.91□□□□□ -1.3
CUX1-219ENST00000606749 ANKRD17O75179 2603 aaKnown RBP6.91□□□□□ -1.3
CUX1-219ENST00000606749 C17orf51A8MQB3 221 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 KIF2AO00139 706 aaPredicted RBP6.9□□□□□ -1.3
CUX1-219ENST00000606749 UPK1AO00322 258 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 FADS1O60427 444 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 TGM6O95932 706 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 PROCP04070 461 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 JUNP05412 331 aaKnown RBP6.9□□□□□ -1.3
CUX1-219ENST00000606749 MYL2P10916 166 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 ZNF708P17019 499 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 DNASE1P24855 282 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 DPP4P27487 766 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 NCBP2P52298 156 aaKnown RBP eCLIP6.9□□□□□ -1.3
CUX1-219ENST00000606749 DSCR4P56555 118 aaPredicted RBP6.9□□□□□ -1.3
CUX1-219ENST00000606749 B3GALT5-AS1P59052 145 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 DNAJB13P59910 316 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 NAA20P61599 178 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 EEF1A1P68104 462 aaKnown RBP6.9□□□□□ -1.3
CUX1-219ENST00000606749 MRPS22P82650 360 aaKnown RBP6.9□□□□□ -1.3
CUX1-219ENST00000606749 GAB1Q13480 694 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 SH2D4BQ5SQS7 431 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 EEF1A1P5Q5VTE0 462 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 ZYG11AQ6WRX3 759 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 CAMKMTQ7Z624 323 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 LUZP2Q86TE4 346 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 TGIF2LYQ8IUE0 185 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 CNPY4Q8N129 248 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 OR2L13Q8N349 312 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 FADS6Q8N9I5 356 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 CHDHQ8NE62 594 aaPredicted RBP6.9□□□□□ -1.3
CUX1-219ENST00000606749 FAM76AQ8TAV0 307 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 MBD6Q96DN6 1003 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 ELP4Q96EB1 424 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 DTNBP1Q96EV8 351 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 DOCK7Q96N67 2140 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 SFXN2Q96NB2 322 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 DACH2Q96NX9 599 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 RHOXF2Q9BQY4 288 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 RTN4RQ9BZR6 473 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 ACBD3Q9H3P7 528 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 DSN1Q9H410 356 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 GLIPR2Q9H4G4 154 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 PLEKHF2Q9H8W4 249 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 TNFRSF12AQ9NP84 129 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 MYNNQ9NPC7 610 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 GALNT8Q9NY28 637 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 MED11Q9P086 117 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 SENP1Q9P0U3 644 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 DKKL1Q9UK85 242 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 GRID1Q9ULK0 1009 aa6.9□□□□□ -1.3
CUX1-219ENST00000606749 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 A8MXE2 369 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 H3BQF6 201 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 HCRTR2O43614 444 aa6.89□□□□□ -1.31
CUX1-219ENST00000606749 PLIN3O60664 434 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms