RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 ZIC3O60481 467 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 TGM6O95932 706 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 HRGP04196 525 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 CTAGE8P0CG41 777 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 FOSL1P15407 271 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 ZNF708P17019 499 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 HOXB4P17483 251 aaPredicted RBP11.92□□□□□ -0.5
RPS28-204ENST00000602140 CHMP24386 653 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 DPP4P27487 766 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 MPIP34949 423 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 PNLIPRP2P54317 469 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 CLDN18P56856 261 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 BTKQ06187 659 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 ACSM2AQ08AH3 577 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 GAB1Q13480 694 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 SPIN4Q56A73 249 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 LGSNQ5TDP6 509 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 ACSM2BQ68CK6 577 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 TIFABQ6ZNK6 161 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 SLC44A2Q8IWA5 706 aaPredicted RBP11.92□□□□□ -0.5
RPS28-204ENST00000602140 CTAGE4Q8IX94 777 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 GBP7Q8N8V2 638 aaPredicted RBP11.92□□□□□ -0.5
RPS28-204ENST00000602140 WFDC11Q8NEX6 87 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 OR7G2Q8NG99 324 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 OR4N2Q8NGD1 307 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 EFHD2Q96C19 240 aaPredicted RBP11.92□□□□□ -0.5
RPS28-204ENST00000602140 MTBPQ96DY7 904 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 BBS4Q96RK4 519 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 EBPLQ9BY08 206 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 PIGMQ9H3S5 423 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 TAS2R9Q9NYW1 312 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 SENP1Q9P0U3 644 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 PACSIN3Q9UKS6 424 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 OR10H1Q9Y4A9 318 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 TIMM22Q9Y584 194 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 VPS13CQ709C8 3753 aa11.92□□□□□ -0.5
RPS28-204ENST00000602140 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 A0A1W2PNV4 684 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 A0A1W2PPR1 153 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 CASKO14936 926 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 PLOD3O60568 738 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 TNFSF13O75888 250 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 IMPDH1P20839 514 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 ATP5F1P24539 256 aaPredicted RBP11.91□□□□□ -0.5
RPS28-204ENST00000602140 GCAP28676 217 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 TIA1P31483 386 aaKnown RBP eCLIP11.91□□□□□ -0.57e-13■■■■■ 30.1
RPS28-204ENST00000602140 CPOXP36551 454 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 GAS1P54826 345 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 DIO3P55073 304 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 EEF1A1P68104 462 aaKnown RBP11.91□□□□□ -0.5
RPS28-204ENST00000602140 PSPHP78330 225 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 EEF1A1P5Q5VTE0 462 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 P4HA3Q7Z4N8 544 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 FAM9CQ8IZT9 166 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 OR4K17Q8NGC6 315 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 RNF138Q8WVD3 245 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 C11orf24Q96F05 449 aaPredicted RBP11.91□□□□□ -0.5
RPS28-204ENST00000602140 KCNA7Q96RP8 456 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 NEUROD4Q9HD90 331 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 NDRG3Q9UGV2 375 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 NFU1Q9UMS0 254 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 STK38LQ9Y2H1 464 aa11.91□□□□□ -0.5
RPS28-204ENST00000602140 FLNAP21333 2647 aaKnown RBP11.91□□□□□ -0.5
RPS28-204ENST00000602140 HCRTR2O43614 444 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 SCO2O43819 266 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 SMNDC1O75940 238 aaKnown RBP eCLIP11.9□□□□□ -0.5
RPS28-204ENST00000602140 ENO1P06733 434 aaKnown RBP11.9□□□□□ -0.5
RPS28-204ENST00000602140 ANXA4P09525 319 aaPredicted RBP11.9□□□□□ -0.5
RPS28-204ENST00000602140 CD53P19397 219 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 HOXC12P31275 282 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 EVI2BP34910 448 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 PRKAA2P54646 552 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 PKNOX1P55347 436 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 DSCR4P56555 118 aaPredicted RBP11.9□□□□□ -0.5
RPS28-204ENST00000602140 B3GALT5-AS1P59052 145 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 MRPS22P82650 360 aaKnown RBP11.9□□□□□ -0.5
RPS28-204ENST00000602140 PSG6Q00889 435 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 C2orf80Q0P641 193 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 ZNF155Q12901 538 aaPredicted RBP11.9□□□□□ -0.5
RPS28-204ENST00000602140 LCP2Q13094 533 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 BCL2A1Q16548 175 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 PRSS53Q2L4Q9 553 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 GLE1Q53GS7 698 aaKnown RBP11.9□□□□□ -0.5
RPS28-204ENST00000602140 SPDYAQ5MJ70 313 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 SH2D4BQ5SQS7 431 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 GALNT18Q6P9A2 607 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 CHMP1BQ7LBR1 199 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 LCA5Q86VQ0 697 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 SLC22A9Q8IVM8 553 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 UBQLNLQ8IYU4 475 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 MNS1Q8NEH6 495 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 CDC26Q8NHZ8 85 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 SMPDL3BQ92485 455 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 ZNF592Q92610 1267 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 L3HYPDHQ96EM0 354 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 STMN4Q9H169 189 aaPredicted RBP11.9□□□□□ -0.5
RPS28-204ENST00000602140 DSN1Q9H410 356 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 PPP4R1LQ9P1A2 415 aa11.9□□□□□ -0.5
RPS28-204ENST00000602140 EIF3LQ9Y262 564 aaKnown RBP11.9□□□□□ -0.5
RPS28-204ENST00000602140 CCDC151A5D8V7 595 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms