RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 UCN3Q969E3 161 aa10.95□□□□□ -0.66
VRK3-223ENST00000601341 BBS4Q96RK4 519 aa10.95□□□□□ -0.66
VRK3-223ENST00000601341 PIP5K1AQ99755 562 aa10.95□□□□□ -0.66
VRK3-223ENST00000601341 ZNF556Q9HAH1 456 aa10.95□□□□□ -0.66
VRK3-223ENST00000601341 AKIP1Q9NQ31 210 aa10.95□□□□□ -0.66
VRK3-223ENST00000601341 PSORS1C1Q9UIG5 152 aa10.95□□□□□ -0.66
VRK3-223ENST00000601341 ENTPD4Q9Y227 616 aa10.95□□□□□ -0.66
VRK3-223ENST00000601341 ZNF780BQ9Y6R6 833 aa10.95□□□□□ -0.66
VRK3-223ENST00000601341 OTOGLQ3ZCN5 2332 aa10.95□□□□□ -0.66
VRK3-223ENST00000601341 RALGAPA1Q6GYQ0 2036 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 BLACEA4D250 179 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 SH3D21A4FU49 640 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 WASHC1A8K0Z3 465 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 CLCA1A8K7I4 914 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 CYR61O00622 381 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 ZNF749O43361 778 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 C1QCP02747 245 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 MT-ND2P03891 347 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 RNH1P13489 461 aaKnown RBP10.94□□□□□ -0.66
VRK3-223ENST00000601341 CYP4B1P13584 511 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 ETFAP13804 333 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 CSNK2A2P19784 350 aaPredicted RBP10.94□□□□□ -0.66
VRK3-223ENST00000601341 ALAS2P22557 587 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 TGM1P22735 817 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 MPIP34949 423 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 RANBP1P43487 201 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 XCR1P46094 333 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 MASP1P48740 699 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 SHC2P98077 582 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 E2F1Q01094 437 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 COL9A2Q14055 689 aaPredicted RBP10.94□□□□□ -0.66
VRK3-223ENST00000601341 FAM180BQ6P0A1 224 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 ZNF605Q86T29 641 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 BPHLQ86WA6 291 aaPredicted RBP10.94□□□□□ -0.66
VRK3-223ENST00000601341 AGBL5Q8NDL9 886 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 OR10G2Q8NGC3 310 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 C9orf43Q8TAL5 461 aaPredicted RBP10.94□□□□□ -0.66
VRK3-223ENST00000601341 DYNC2LI1Q8TCX1 351 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 APH1BQ8WW43 257 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 RASSF5Q8WWW0 418 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 TAMM41Q96BW9 452 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 NEURL3Q96EH8 262 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 MMABQ96EY8 250 aaPredicted RBP10.94□□□□□ -0.66
VRK3-223ENST00000601341 OR6C1Q96RD1 312 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 FEVQ99581 238 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 ITPAQ9BY32 194 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 A4GALTQ9NPC4 353 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 KCND3Q9UK17 655 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 SRPK3Q9UPE1 567 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 ENPP4Q9Y6X5 453 aa10.94□□□□□ -0.66
VRK3-223ENST00000601341 KPNA4O00629 521 aaPredicted RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 PDE9AO76083 593 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 DIRAS1O95057 198 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 CHI3L1P36222 383 aaPredicted RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 GCGRP47871 477 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 SIM1P81133 766 aaPredicted RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 IL1RL1Q01638 556 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 PIGFQ07326 219 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 CEBPEQ15744 281 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 REEP3Q6NUK4 255 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 TUBA3EQ6PEY2 450 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 GALNT10Q86SR1 603 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 SLCO6A1Q86UG4 719 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 OR4K14Q8NGD5 310 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 PSMA8Q8TAA3 256 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 SLC38A4Q969I6 547 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 MAL2Q969L2 176 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 CNRIP1Q96F85 164 aaPredicted RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 CRELD1Q96HD1 420 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 AMDHD1Q96NU7 426 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 SLAMF7Q9NQ25 335 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 EXD2Q9NVH0 621 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 SIDT1Q9NXL6 827 aaKnown RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 HCN3Q9P1Z3 774 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 NDOR1Q9UHB4 597 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 RAPGEFL1Q9UHV5 662 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 RARRES3Q9UL19 164 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 RNF6Q9Y252 685 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 MRPS33Q9Y291 106 aaKnown RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 FAM32AQ9Y421 112 aaKnown RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 ASCC3Q8N3C0 2202 aaKnown RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 A0A1B0GX78 115 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 DSCR3O14972 297 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 RFPL3O75679 317 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 OXSR1O95747 527 aaPredicted RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 CDK1P06493 297 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 OCM2P0CE71 109 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 OCMP0CE72 109 aaPredicted RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 GABRB1P18505 474 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 EPHA2P29317 976 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 FEN1P39748 380 aaKnown RBP10.93□□□□□ -0.66
VRK3-223ENST00000601341 NCBP2P52298 156 aaKnown RBP eCLIP10.93□□□□□ -0.66
VRK3-223ENST00000601341 DSTNP60981 165 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 HSPB3Q12988 150 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 IL11RAQ14626 422 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 LAPTM4AQ15012 233 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 TBC1D25Q3MII6 688 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 ANKDD1AQ495B1 522 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 COX20Q5RI15 118 aa10.93□□□□□ -0.66
VRK3-223ENST00000601341 SAXO2Q658L1 398 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms