RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 PHEXP78562 749 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 MRPS35P82673 323 aaKnown RBP5.49□□□□□ -1.53
VRK3-220ENST00000600259 OCRLQ01968 901 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 PLCXD2Q0VAA5 305 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 ACAP2Q15057 778 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 TRADDQ15628 312 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.49□□□□□ -1.53
VRK3-220ENST00000600259 PRSS53Q2L4Q9 553 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 ZNF628Q5EBL2 1059 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 TECRLQ5HYJ1 363 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 CCNYL2Q5T2Q4 361 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 FRG2Q64ET8 278 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 STAC2Q6ZMT1 411 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 DNM1P46Q6ZS02 220 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 RAPH1Q70E73 1250 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 COMMD6Q7Z4G1 85 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 TBC1D1Q86TI0 1168 aaPredicted RBP5.49□□□□□ -1.53
VRK3-220ENST00000600259 HIPK1Q86Z02 1210 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 PLD6Q8N2A8 252 aaKnown RBP5.49□□□□□ -1.53
VRK3-220ENST00000600259 TMEM151AQ8N4L1 468 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 MEIOBQ8N635 442 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 PPM1NQ8N819 430 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 ZNF611Q8N823 705 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 CNEP1R1Q8N9A8 125 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 MAPK1IP1LQ8NDC0 245 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 OR4N2Q8NGD1 307 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 FNDC9Q8TBE3 224 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 ZNF675Q8TD23 568 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 CAVIN3Q969G5 261 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 ZDHHC16Q969W1 377 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 TMCO6Q96DC7 493 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 ZC3HAV1LQ96H79 300 aaKnown RBP5.49□□□□□ -1.53
VRK3-220ENST00000600259 ZNF845Q96IR2 970 aaPredicted RBP5.49□□□□□ -1.53
VRK3-220ENST00000600259 NSUN5Q96P11 429 aaKnown RBP5.49□□□□□ -1.53
VRK3-220ENST00000600259 FAM111AQ96PZ2 611 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 FRG2BQ96QU4 278 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 SLC39A3Q9BRY0 314 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 ERP44Q9BS26 406 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 BRINP2Q9C0B6 783 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 DSN1Q9H410 356 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 PRODH2Q9UF12 536 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 ZNF175Q9Y473 711 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 ANGPTL3Q9Y5C1 460 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 EXPH5Q8NEV8 1989 aa5.49□□□□□ -1.53
VRK3-220ENST00000600259 HEATR5AQ86XA9 2040 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 ALPK2Q86TB3 2170 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 IGLV3-32A0A0A0MS00 114 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 GOLGA6L10A6NI86 522 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 RNF223E7ERA6 249 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 CCDC188H7C350 402 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 HS3ST1O14792 307 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 PLOD3O60568 738 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 ERAL1O75616 437 aaKnown RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 ALDOAP04075 364 aaKnown RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 SBK3P0C264 359 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 DANCRP0C864 163 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 GFAPP14136 432 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 TCEA1P23193 301 aaKnown RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 MAGEA4P43358 317 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 SLC6A8P48029 635 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 MAPK12P53778 367 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 ATP5J2P56134 94 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 RAE1P78406 368 aaKnown RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 PSG6Q00889 435 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 EFR3AQ14156 821 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 FAM83EQ2M2I3 478 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 GLYR1Q49A26 553 aaPredicted RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 GGTA1PQ4G0N0 100 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 BEX5Q5H9J7 111 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 C10orf62Q5T681 223 aaPredicted RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 MROH9Q5TGP6 573 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 HMBOX1Q6NT76 420 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 ADAM5Q6NVV9 412 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 ZDHHC24Q6UX98 284 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 APOOLQ6UXV4 268 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 ZNF704Q6ZNC4 412 aaPredicted RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 LARP4Q71RC2 724 aaKnown RBP eCLIP5.48□□□□□ -1.53
VRK3-220ENST00000600259 RPS27LQ71UM5 84 aaKnown RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 FAM214BQ7L5A3 538 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 PAGE2Q7Z2X7 111 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 P4HA3Q7Z4N8 544 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 CCDC91Q7Z6B0 441 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 MILR1Q7Z6M3 343 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 GGNQ86UU5 652 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 CTAGE3PQ8IX95 158 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 UBQLNLQ8IYU4 475 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 CCDC116Q8IYX3 515 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 METTL25Q8N6Q8 603 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 PTGR2Q8N8N7 351 aaPredicted RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 GBP7Q8N8V2 638 aaPredicted RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 OR4F6Q8NGB9 312 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 OR5M1Q8NGP8 315 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 FBF1Q8TES7 1133 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 DUSP19Q8WTR2 217 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 TMEM171Q8WVE6 324 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 KAT2AQ92830 837 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 ERP27Q96DN0 273 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 C11orf24Q96F05 449 aaPredicted RBP5.48□□□□□ -1.53
VRK3-220ENST00000600259 ADGRG7Q96K78 797 aa5.48□□□□□ -1.53
VRK3-220ENST00000600259 NPAS1Q99742 590 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms