RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 FAM174BQ3ZCQ3 159 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 CYP27C1Q4G0S4 372 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 TBCELQ5QJ74 424 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 FNDC7Q5VTL7 733 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 RGS9BPQ6ZS82 235 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 CLEC4FQ8N1N0 589 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 SLC16A11Q8NCK7 471 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 OR8J2Q8NGG1 315 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 OR5AK3PQ8NH89 298 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 GPR151Q8TDV0 419 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 HOXB13Q92826 284 aaPredicted RBP13.93□□□□□ -0.18
LIG1-219ENST00000600055 TESCQ96BS2 214 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 TMCO6Q96DC7 493 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 THOC1Q96FV9 657 aaKnown RBP13.93□□□□□ -0.18
LIG1-219ENST00000600055 EBF4Q9BQW3 602 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 Q9N2J8 555 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 MED4Q9NPJ6 270 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 FLRT3Q9NZU0 649 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 SH3BGRL2Q9UJC5 107 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 ERRFI1Q9UJM3 462 aaPredicted RBP13.93□□□□□ -0.18
LIG1-219ENST00000600055 BOKQ9UMX3 212 aaPredicted RBP13.93□□□□□ -0.18
LIG1-219ENST00000600055 HRH3Q9Y5N1 445 aa13.93□□□□□ -0.18
LIG1-219ENST00000600055 TRGV8A0A0C4DH27 118 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 PRAMEF25A6NGN4 478 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 E9PBE3 544 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 RNASET2O00584 256 aaKnown RBP13.92□□□□□ -0.18
LIG1-219ENST00000600055 GNB5O14775 395 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 UBDO15205 165 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 LRRTM2O43300 516 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 SLC19A2O60779 497 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 ICOSLGO75144 302 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 AGFG2O95081 481 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 NKX2-2O95096 273 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 SNX4O95219 450 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 CPSF4O95639 269 aaKnown RBP13.92□□□□□ -0.18
LIG1-219ENST00000600055 IGKV1D-16P01601 117 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 HMGN2P05204 90 aaKnown RBP13.92□□□□□ -0.18
LIG1-219ENST00000600055 S100A3P33764 101 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 SOAT1P35610 550 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 PNLIPRP2P54317 469 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 PRR5P85299 388 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 RBPJQ06330 500 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 TP53BP2Q13625 1128 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 LASP1Q14847 261 aaKnown RBP13.92□□□□□ -0.18
LIG1-219ENST00000600055 C3AR1Q16581 482 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 DUSP5Q16690 384 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 DECR1Q16698 335 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 SPDYE7PQ495Y7 208 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 EXOSC6Q5RKV6 272 aaKnown RBP13.92□□□□□ -0.18
LIG1-219ENST00000600055 BNC2Q6ZN30 1099 aaPredicted RBP13.92□□□□□ -0.18
LIG1-219ENST00000600055 GALNT10Q86SR1 603 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 SPPL2CQ8IUH8 684 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 FAM109AQ8N4B1 249 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 CDRT4Q8N9R6 151 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 OR4A15Q8NGL6 344 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 RMND5BQ96G75 393 aaPredicted RBP13.92□□□□□ -0.18
LIG1-219ENST00000600055 ZNF597Q96LX8 424 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 GNRHR2Q96P88 292 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 OSBPL11Q9BXB4 747 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 ZNF703Q9H7S9 590 aaPredicted RBP13.92□□□□□ -0.18
LIG1-219ENST00000600055 PLSCR2Q9NRY7 297 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 KLRF1Q9NZS2 232 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 ZNF835Q9Y2P0 537 aa13.92□□□□□ -0.18
LIG1-219ENST00000600055 PRSS51A0A1B0GVH4 220 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 TTC36A6NLP5 189 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 C17orf51A8MQB3 221 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 ABCB7O75027 752 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 TGDSO95455 350 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 IL33O95760 270 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 ALOX5P09917 674 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 IDO1P14902 403 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 MASP1P48740 699 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 PRIM2P49643 509 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 AQP5P55064 265 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 PSPHP78330 225 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 MRPS22P82650 360 aaKnown RBP13.91□□□□□ -0.18
LIG1-219ENST00000600055 EFR3AQ14156 821 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 SLC10A1Q14973 349 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 PDCD4Q53EL6 469 aaKnown RBP13.91□□□□□ -0.18
LIG1-219ENST00000600055 C4orf17Q53FE4 359 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 SLC30A6Q6NXT4 461 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 TMEM81Q6P7N7 255 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 ANGPTL8Q6UXH0 198 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 ACAD11Q709F0 780 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 PACS2Q86VP3 889 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 FJX1Q86VR8 437 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 OR56A1Q8NGH5 318 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 SFXN5Q8TD22 340 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 JADE3Q92613 823 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 CHMP6Q96FZ7 201 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 TMEM41AQ96HV5 264 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 NEUROD4Q9HD90 331 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 TCF7L2Q9NQB0 619 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 GPATCH2Q9NW75 528 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 TINAGQ9UJW2 476 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 SLC5A6Q9Y289 635 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 KCNE3Q9Y6H6 103 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 ESPL1Q14674 2120 aa13.91□□□□□ -0.18
LIG1-219ENST00000600055 SLC22A3O75751 556 aa13.9□□□□□ -0.18
LIG1-219ENST00000600055 IGHG3P01860 377 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms