RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 TMBIM1Q969X1 311 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 SARAFQ96BY9 339 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 PPCDCQ96CD2 204 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 ELP4Q96EB1 424 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 ZBED6CLQ96FA7 236 aaPredicted RBP7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 C3orf30Q96M34 536 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 JSRP1Q96MG2 331 aaPredicted RBP7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 COL21A1Q96P44 957 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 LMF2Q9BU23 707 aaKnown RBP7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 OSBPL11Q9BXB4 747 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 SLC6A15Q9H2J7 730 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 METTL7AQ9H8H3 244 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 PNPLA3Q9NST1 481 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 ACSS1Q9NUB1 689 aaPredicted RBP7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 DDX18Q9NVP1 670 aaKnown RBP7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 SPRR3Q9UBC9 169 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 BAIAP2L1Q9UHR4 511 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 ATP6V1HQ9UI12 483 aa7.3□□□□□ -1.24
CHMP2A-205ENST00000600006 TTC36A6NLP5 189 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 FIGNL2A6NMB9 653 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 PRSS44E7EML9 344 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 SCAMP2O15127 329 aaKnown RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 EDF1O60869 148 aaKnown RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 WDR1O75083 606 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 PEX11AO75192 247 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 REM1O75628 298 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 HPNP05981 417 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 PRPS2P11908 318 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 DDX5P17844 614 aaKnown RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 KRT20P35900 424 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 MASP1P48740 699 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 CDK9P50750 372 aaKnown RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 PNLIPRP2P54317 469 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 C21orf58P58505 322 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 IRX1P78414 480 aaPredicted RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 MRPS22P82650 360 aaKnown RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 HSPB3Q12988 150 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 EFR3AQ14156 821 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 PTGR1Q14914 329 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 MLC1Q15049 377 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 PDCD2Q16342 344 aaPredicted RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 GXYLT1Q4G148 440 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 ZNF787Q6DD87 383 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 OGFOD2Q6N063 350 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 ANGPTL8Q6UXH0 198 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 ZNF551Q7Z340 670 aaPredicted RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 R3HCC1LQ7Z5L2 792 aaKnown RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 PACS2Q86VP3 889 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 SLC44A2Q8IWA5 706 aaPredicted RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 LIX1Q8N485 282 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 RPRMLQ8N4K4 120 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 FNDC5Q8NAU1 212 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 NEIL3Q8TAT5 605 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 CIDECQ96AQ7 238 aaPredicted RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 TUBGCP3Q96CW5 907 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 TMCO6Q96DC7 493 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 ADOQ96SZ5 270 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 C1orf50Q9BV19 199 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 LDAHQ9H6V9 325 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 ZNF395Q9H8N7 513 aaPredicted RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 SLCO1B3Q9NPD5 702 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 PNPOQ9NVS9 261 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 ASIC5Q9NY37 505 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 KLRF1Q9NZS2 232 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 NTMQ9P121 344 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 MAPRE3Q9UPY8 281 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 PCDHGB3Q9Y5G1 929 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 FAM215AQ9Y5M1 114 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 USH1CQ9Y6N9 552 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 COL12A1Q99715 3063 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 PCNX1Q96RV3 2341 aa7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 UTP20O75691 2785 aaKnown RBP7.29□□□□□ -1.24
CHMP2A-205ENST00000600006 UNC79Q9P2D8 2635 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 GNB5O14775 395 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 ICOSLGO75144 302 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 CLDN14O95500 239 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 TROVE2P10155 538 aaKnown RBP eCLIP7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 KITP10721 976 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 CYP4B1P13584 511 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 LBPP18428 481 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 ACVR2AP27037 513 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 GRNP28799 593 aaKnown RBP7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 IL12BP29460 328 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 GPC1P35052 558 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 MAP3K8P41279 467 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 NUP107P57740 925 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 GUCY1A3Q02108 690 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 EMX2Q04743 252 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 CRYZQ08257 329 aaKnown RBP7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 CDSNQ15517 529 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 ZNF630Q2M218 657 aaPredicted RBP7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 CYP27C1Q4G0S4 372 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 NHSL2Q5HYW2 709 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 C1orf185Q5T7R7 199 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 WLSQ5T9L3 541 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 IL23RQ5VWK5 629 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 RTL6Q6ICC9 239 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 TMEM211Q6ICI0 200 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 ACAD11Q709F0 780 aa7.28□□□□□ -1.24
CHMP2A-205ENST00000600006 LARP4Q71RC2 724 aaKnown RBP eCLIP7.28□□□□□ -1.245e-6■■■■□ 22.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms