RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 FLRT3Q9NZU0 649 aa17.87■□□□□ 0.45
SHKBP1-221ENST00000599833 PRSS51A0A1B0GVH4 220 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 NPIPA5E9PKD4 350 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 UBDO15205 165 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 ZNHIT1O43257 154 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 HMGN2P05204 90 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 CYP4B1P13584 511 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 PNLIPRP2P54317 469 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 PRKAG1P54619 331 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 KCNK10P57789 538 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 PSPHP78330 225 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 GUCY1A3Q02108 690 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 EIF2S3LQ2VIR3 472 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 CYP27C1Q4G0S4 372 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 ZCCHC12Q6PEW1 402 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 GK5Q6ZS86 529 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 CLEC4FQ8N1N0 589 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 CDRT4Q8N9R6 151 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 GOT1L1Q8NHS2 421 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 FBXO30Q8TB52 745 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 EFHD2Q96C19 240 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 OTUB1Q96FW1 271 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 RILPQ96NA2 401 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 CCDC115Q96NT0 180 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 RTN4RQ9BZR6 473 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 UBQLN3Q9H347 655 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 ZNF703Q9H7S9 590 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 C3orf14Q9HBI5 128 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 SLC52A3Q9NQ40 469 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 ZCCHC3Q9NUD5 404 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 ZIM2Q9NZV7 527 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 CBLCQ9ULV8 474 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 NPIPA1Q9UND3 350 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 LIPGQ9Y5X9 500 aa17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-221ENST00000599833 ASH1LQ9NR48 2969 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 TTC36A6NLP5 189 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 FAM166BA8MTA8 275 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 TP53I11O14683 189 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 ASNA1O43681 348 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 UNC5CO95185 931 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 IL33O95760 270 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 PGRP06401 933 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 CELA3AP09093 270 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 CCT3P49368 545 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 PPIAP62937 165 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 HSF1Q00613 529 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 DOPEY1Q5JWR5 2465 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 TBCELQ5QJ74 424 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 PAOXQ6QHF9 649 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 BNC2Q6ZN30 1099 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 ZAR1Q86SH2 424 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 FUNDC1Q8IVP5 155 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 OR5AK3PQ8NH89 298 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 THOC1Q96FV9 657 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 ZFP64Q9NPA5 681 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 FBXO34Q9NWN3 711 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 FAM120CQ9NX05 1096 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 SEC14L3Q9UDX4 400 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 BTNL2Q9UIR0 455 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 ZNF835Q9Y2P0 537 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 KCNE3Q9Y6H6 103 aa17.85■□□□□ 0.45
SHKBP1-221ENST00000599833 USP9YO00507 2555 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 C17orf51A8MQB3 221 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 FADS1O60427 444 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 REM1O75628 298 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 IGHG3P01860 377 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 PTPN6P29350 595 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 GABRA3P34903 492 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 CDKN2CP42773 168 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 MRPS22P82650 360 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 PRR5P85299 388 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 KCNC4Q03721 635 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 LASP1Q14847 261 aaKnown RBP17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 CDC73Q6P1J9 531 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 ARFGAP2Q8N6H7 521 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 GLB1L3Q8NCI6 653 aaPredicted RBP17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 OR56A1Q8NGH5 318 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 TMEM41AQ96HV5 264 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 YIPF4Q9BSR8 244 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 INPP5KQ9BT40 448 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 DOHHQ9BU89 302 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 GALNT9Q9HCQ5 603 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 Q9N2J8 555 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 SLC6A13Q9NSD5 602 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 GIN1Q9NXP7 522 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 SNX8Q9Y5X2 465 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 PTPN13Q12923 2485 aa17.84■□□□□ 0.45
SHKBP1-221ENST00000599833 MED12Q93074 2177 aa17.83■□□□□ 0.45
SHKBP1-221ENST00000599833 TFECO14948 347 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 POLR3GO15318 223 aaPredicted RBP17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 ABCB7O75027 752 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 ICOSLGO75144 302 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 SEMA7AO75326 666 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 SLC22A3O75751 556 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 KCNK2O95069 426 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 SNX4O95219 450 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 STSP08842 583 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 RNF224P0DH78 156 aa17.83■□□□□ 0.44
SHKBP1-221ENST00000599833 HOXB9P17482 250 aaPredicted RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms