RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 DESI1Q6ICB0 168 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 GBP7Q8N8V2 638 aaPredicted RBP17.08■□□□□ 0.32
PNKP-213ENST00000599543 OR6Y1Q8NGX8 325 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 NRGNQ92686 78 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 ZNF681Q96N22 645 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 NODALQ96S42 347 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 SH3GL2Q99962 352 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 TRMOQ9BU70 441 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 POLDIP3Q9BY77 421 aaKnown RBP17.08■□□□□ 0.32
PNKP-213ENST00000599543 C20orf27Q9GZN8 174 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 TUBB1Q9H4B7 451 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 GALNT9Q9HCQ5 603 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 CRIM1Q9NZV1 1036 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 HEY2Q9UBP5 337 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 GIMAP2Q9UG22 337 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 ZDHHC2Q9UIJ5 367 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 MAPRE3Q9UPY8 281 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 DLGAP4Q9Y2H0 992 aa17.08■□□□□ 0.32
PNKP-213ENST00000599543 PRAMEF25A6NGN4 478 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 FRG2CA6NGY1 282 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 UGT2B11O75310 529 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 SKAP2O75563 359 aaPredicted RBP17.07■□□□□ 0.32
PNKP-213ENST00000599543 CTAG2O75638 210 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 BCAS2O75934 225 aaPredicted RBP17.07■□□□□ 0.32
PNKP-213ENST00000599543 HSPA4LO95757 839 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 ACTL6AO96019 429 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 IL3P08700 152 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 DRD2P14416 443 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 DRD5P21918 477 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 SOX18P35713 384 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 PPICP45877 212 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 EMDP50402 254 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 ZNF136P52737 540 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 ACSM2AQ08AH3 577 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 RCAN2Q14206 197 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 KANK2Q63ZY3 851 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 ACSM2BQ68CK6 577 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 YRDCQ86U90 279 aaKnown RBP17.07■□□□□ 0.32
PNKP-213ENST00000599543 DDIASQ8IXT1 998 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 CCDC116Q8IYX3 515 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 SAMD14Q8IZD0 417 aaPredicted RBP17.07■□□□□ 0.32
PNKP-213ENST00000599543 OR2T11Q8NH01 316 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 CDC26Q8NHZ8 85 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 ZNF675Q8TD23 568 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 RNASE6Q93091 150 aaKnown RBP17.07■□□□□ 0.32
PNKP-213ENST00000599543 NTNG2Q96CW9 530 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 TMCO6Q96DC7 493 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 ERP27Q96DN0 273 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 WDYHV1Q96HA8 205 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 ATP6V1G3Q96LB4 118 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 GPATCH1Q9BRR8 931 aaKnown RBP17.07■□□□□ 0.32
PNKP-213ENST00000599543 SERHLQ9NQF3 203 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 GIMAP4Q9NUV9 329 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 ZNF446Q9NWS9 450 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 FOXD3Q9UJU5 478 aaPredicted RBP17.07■□□□□ 0.32
PNKP-213ENST00000599543 TRAF6Q9Y4K3 522 aa17.07■□□□□ 0.32
PNKP-213ENST00000599543 C2orf72A6NCS6 295 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 CD8B2A6NJW9 211 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 PIP5K1BO14986 540 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 TO15178 435 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 BIRC5O15392 142 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 SERPINE1P05121 402 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 PTGDSP41222 190 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 ABCE1P61221 599 aaKnown RBP17.06■□□□□ 0.32
PNKP-213ENST00000599543 HEPACAMQ14CZ8 416 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 FBXL19-AS1Q494R0 122 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 FLYWCH1Q4VC44 716 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 ZNF628Q5EBL2 1059 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 OR9A2Q8NGT5 310 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 OR14L1PQ8NHC6 308 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 TWIST2Q8WVJ9 160 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 TMBIM1Q969X1 311 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 EXOSC8Q96B26 276 aaKnown RBP17.06■□□□□ 0.32
PNKP-213ENST00000599543 PPP1R36Q96LQ0 422 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 COL21A1Q96P44 957 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 CLEC4MQ9H2X3 399 aaPredicted RBP17.06■□□□□ 0.32
PNKP-213ENST00000599543 EML4Q9HC35 981 aaKnown RBP17.06■□□□□ 0.32
PNKP-213ENST00000599543 NKIRAS1Q9NYS0 192 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 EXO1Q9UQ84 846 aaKnown RBP17.06■□□□□ 0.32
PNKP-213ENST00000599543 POLR3HQ9Y535 204 aaPredicted RBP17.06■□□□□ 0.32
PNKP-213ENST00000599543 DNAJC15Q9Y5T4 150 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 ABCA4P78363 2273 aa17.06■□□□□ 0.32
PNKP-213ENST00000599543 ZNF469Q96JG9 3925 aaPredicted RBP17.05■□□□□ 0.32
PNKP-213ENST00000599543 MBD3L4A6NDZ8 208 aaPredicted RBP17.05■□□□□ 0.32
PNKP-213ENST00000599543 MBD3L3A6NE82 208 aaPredicted RBP17.05■□□□□ 0.32
PNKP-213ENST00000599543 OR6C70A6NIJ9 312 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 MBD3L5A6NJ08 208 aaPredicted RBP17.05■□□□□ 0.32
PNKP-213ENST00000599543 ABCB7O75027 752 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 REM1O75628 298 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 CBR3O75828 277 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 CYP4B1P13584 511 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 TIA1P31483 386 aaKnown RBP eCLIP17.05■□□□□ 0.32
PNKP-213ENST00000599543 KRT20P35900 424 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 UGT3A2Q3SY77 523 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 ZNF781Q8N8C0 355 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 MBD3L2Q8NHZ7 208 aaPredicted RBP17.05■□□□□ 0.32
PNKP-213ENST00000599543 KAT2AQ92830 837 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 DTNBP1Q96EV8 351 aa17.05■□□□□ 0.32
PNKP-213ENST00000599543 RMND5BQ96G75 393 aaPredicted RBP17.05■□□□□ 0.32
PNKP-213ENST00000599543 BTBD9Q96Q07 612 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms