RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 FUT8Q9BYC5 575 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 SHCBP1LQ9BZQ2 653 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 MRPL46Q9H2W6 279 aaKnown RBP19.14■□□□□ 0.65
PNKP-212ENST00000599454 C6orf203Q9P0P8 240 aaPredicted RBP19.14■□□□□ 0.65
PNKP-212ENST00000599454 PYCARDQ9ULZ3 195 aa19.14■□□□□ 0.65
PNKP-212ENST00000599454 A0A1B0GTL3 188 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 DEFB108AA8MXU0 73 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 SMNDC1O75940 238 aaKnown RBP eCLIP19.13■□□□□ 0.65
PNKP-212ENST00000599454 GAS1P54826 345 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 CSTF3Q12996 717 aaKnown RBP19.13■□□□□ 0.65
PNKP-212ENST00000599454 FGFBP1Q14512 234 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 FAM180BQ6P0A1 224 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 CCDC116Q8IYX3 515 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 MEIOBQ8N635 442 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 CNEP1R1Q8N9A8 125 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 FAM111AQ96PZ2 611 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 SLC39A3Q9BRY0 314 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 BDH2Q9BUT1 245 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 STMN4Q9H169 189 aaPredicted RBP19.13■□□□□ 0.65
PNKP-212ENST00000599454 ZDHHC18Q9NUE0 388 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 GIMAP4Q9NUV9 329 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 HEY2Q9UBP5 337 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 NFU1Q9UMS0 254 aa19.13■□□□□ 0.65
PNKP-212ENST00000599454 LINC01387J3KSC0 135 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 LY6G6DO95868 133 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 KRT6AP02538 564 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 KRT6BP04259 564 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 KRT6CP48668 564 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 CDH13P55290 713 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 CORO7P57737 925 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 B3GALT5-AS1P59052 145 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 ACKR1Q16570 336 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 OR5M10Q6IEU7 315 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 C20orf204Q6ZNR8 217 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 ZNF572Q7Z3I7 529 aaPredicted RBP19.12■□□□□ 0.65
PNKP-212ENST00000599454 RELL1Q8IUW5 271 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 PGM2Q96G03 612 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 MED18Q9BUE0 208 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 FOLH1BQ9HBA9 442 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 KLHL28Q9NXS3 571 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 TAS2R9Q9NYW1 312 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 NINJ2Q9NZG7 142 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 PPP4R1LQ9P1A2 415 aa19.12■□□□□ 0.65
PNKP-212ENST00000599454 ESYT3A0FGR9 886 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 PPP6CO00743 305 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 SIAH2O43255 324 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 PLOD3O60568 738 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 POU2F1P14859 743 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 CASQ1P31415 396 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 GANABQ14697 944 aaKnown RBP19.11■□□□□ 0.65
PNKP-212ENST00000599454 HEPACAMQ14CZ8 416 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 VWA1Q6PCB0 445 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 NPSR1Q6W5P4 371 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 RPS27LQ71UM5 84 aaKnown RBP19.11■□□□□ 0.65
PNKP-212ENST00000599454 FADS6Q8N9I5 356 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 OR9A2Q8NGT5 310 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 NUDT8Q8WV74 236 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 KAT2AQ92830 837 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 PIK3IP1Q96FE7 263 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 CCL19Q99731 98 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 ANKRA2Q9H9E1 313 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 SDHAF3Q9NRP4 125 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 OR10H1Q9Y4A9 318 aa19.11■□□□□ 0.65
PNKP-212ENST00000599454 RTTNQ86VV8 2226 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 A8MT66 165 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 MANBAO00462 879 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 EMC8O43402 210 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 PCDH7O60245 1069 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 TNFRSF21O75509 655 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 OR4F21O95013 312 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 IL3P08700 152 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 CD8BP10966 210 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 EVI2BP34910 448 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 UGT2B10P36537 528 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 HSD17B3P37058 310 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 KIR2DL2P43627 348 aaPredicted RBP19.1■□□□□ 0.65
PNKP-212ENST00000599454 GSTM5P46439 218 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 CLCQ05315 142 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 RASA2Q15283 850 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 SPIN4Q56A73 249 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 ZNF474Q6S9Z5 364 aaPredicted RBP19.1■□□□□ 0.65
PNKP-212ENST00000599454 BTLAQ7Z6A9 289 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 SLC44A2Q8IWA5 706 aaPredicted RBP19.1■□□□□ 0.65
PNKP-212ENST00000599454 FAM9CQ8IZT9 166 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 EXOSC8Q96B26 276 aaKnown RBP19.1■□□□□ 0.65
PNKP-212ENST00000599454 MTBPQ96DY7 904 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 ZNF845Q96IR2 970 aaPredicted RBP19.1■□□□□ 0.65
PNKP-212ENST00000599454 Q96MF0 132 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 HBEGFQ99075 208 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 PAFAH2Q99487 392 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 TSPYL1Q9H0U9 437 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 SLC35C2Q9NQQ7 365 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 SENP1Q9P0U3 644 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 ZNF225Q9UK10 706 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 ABCG2Q9UNQ0 655 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 ZNF175Q9Y473 711 aa19.1■□□□□ 0.65
PNKP-212ENST00000599454 GNG14A0A1W2PPG7 69 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 B4DXG7 233 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 C16orf97H3BN30 126 aa19.09■□□□□ 0.65
PNKP-212ENST00000599454 H7C1Q1 480 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms