RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ZNF630Q2M218 657 aaPredicted RBP12.94□□□□□ -0.34
LIG1-218ENST00000599322 LSM12Q3MHD2 195 aaKnown RBP12.94□□□□□ -0.34
LIG1-218ENST00000599322 UGT3A2Q3SY77 523 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 CT45A2Q5DJT8 189 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 CPTPQ5TA50 214 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 IL23RQ5VWK5 629 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 OR2L13Q8N349 312 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 ANKRD42Q8N9B4 389 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 SIMC1Q8NDZ2 872 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 CLHC1Q8NHS4 586 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 HGDQ93099 445 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 CHMP6Q96FZ7 201 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 DMRTA2Q96SC8 542 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 ANKRA2Q9H9E1 313 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 PROK2Q9HC23 129 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 CBLCQ9ULV8 474 aa12.94□□□□□ -0.34
LIG1-218ENST00000599322 A0A1W2PRB8 838 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 ENO4A6NNW6 628 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 AHRRA9YTQ3 701 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 UPK1AO00322 258 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 SNPHO15079 494 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 EMC8O43402 210 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 SOX30O94993 753 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 HPNP05981 417 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 RFX3P48380 749 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 PRIM2P49643 509 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 RPL14P50914 215 aaKnown RBP12.93□□□□□ -0.34
LIG1-218ENST00000599322 GTF3C1Q12789 2109 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 SMU1Q2TAY7 513 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 SPDYE7PQ495Y7 208 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 C6orf136Q5SQH8 315 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 C1orf185Q5T7R7 199 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 BICRALQ6AI39 1079 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 ANKRD26P1Q6NSI1 321 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 ZCCHC12Q6PEW1 402 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 ENPP6Q6UWR7 440 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 ZNF551Q7Z340 670 aaPredicted RBP12.93□□□□□ -0.34
LIG1-218ENST00000599322 PLCZ1Q86YW0 608 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 CDRT4Q8N9R6 151 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 NUP43Q8NFH3 380 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 OR4K17Q8NGC6 315 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 OR14L1PQ8NHC6 308 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 GPR151Q8TDV0 419 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 EFHD2Q96C19 240 aaPredicted RBP12.93□□□□□ -0.34
LIG1-218ENST00000599322 LRRC46Q96FV0 321 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 NODALQ96S42 347 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 SLC6A15Q9H2J7 730 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 KCNJ16Q9NPI9 418 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 NOP53Q9NZM5 478 aaKnown RBP12.93□□□□□ -0.34
LIG1-218ENST00000599322 PCDHGB4Q9UN71 923 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 EXO1Q9UQ84 846 aaKnown RBP12.93□□□□□ -0.34
LIG1-218ENST00000599322 LIPGQ9Y5X9 500 aa12.93□□□□□ -0.34
LIG1-218ENST00000599322 SCAMP2O15127 329 aaKnown RBP12.92□□□□□ -0.34
LIG1-218ENST00000599322 CFLARO15519 480 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 TSPAN2O60636 221 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 ACTL6AO96019 429 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 KRT16P08779 473 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 GABRA3P34903 492 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 RCAN2Q14206 197 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 PDCD2Q16342 344 aaPredicted RBP12.92□□□□□ -0.34
LIG1-218ENST00000599322 XKR7Q5GH72 579 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 ATG16L1Q676U5 607 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 AAGABQ6PD74 315 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 BHLHB9Q6PI77 547 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 GOLGA6L1Q8N7Z2 621 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 SLC9A6Q92581 669 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 ABTB1Q969K4 478 aaPredicted RBP12.92□□□□□ -0.34
LIG1-218ENST00000599322 MARVELD3Q96A59 401 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 CIDECQ96AQ7 238 aaPredicted RBP12.92□□□□□ -0.34
LIG1-218ENST00000599322 C1orf50Q9BV19 199 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 PTGES2Q9H7Z7 377 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 EQTNQ9NQ60 294 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 PPP4R1LQ9P1A2 415 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 ATP6V1HQ9UI12 483 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 DKKL1Q9UK85 242 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 ABCG2Q9UNQ0 655 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 CAMK2AQ9UQM7 478 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 WIF1Q9Y5W5 379 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 SNX8Q9Y5X2 465 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 ABCA12Q86UK0 2595 aa12.92□□□□□ -0.34
LIG1-218ENST00000599322 C2orf72A6NCS6 295 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 ADAM10O14672 748 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 ALOX5P09917 674 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 HPGDP15428 266 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 BGNP21810 368 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 PTPN6P29350 595 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 ZFP36L2P47974 494 aaKnown RBP12.91□□□□□ -0.34
LIG1-218ENST00000599322 NUP107P57740 925 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 PSG6Q00889 435 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 EMX2Q04743 252 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 GAB1Q13480 694 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 TP53BP2Q13625 1128 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 PDE7AQ13946 482 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 MLC1Q15049 377 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 NPSR1Q6W5P4 371 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 CHMP1BQ7LBR1 199 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 YRDCQ86U90 279 aaKnown RBP12.91□□□□□ -0.34
LIG1-218ENST00000599322 ZNF781Q8N8C0 355 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 VPS37AQ8NEZ2 397 aa12.91□□□□□ -0.34
LIG1-218ENST00000599322 OR6Y1Q8NGX8 325 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms