RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 ATP6V1C1P21283 382 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 ERFP50548 548 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 PCBP3P57721 371 aaKnown RBP14.33□□□□□ -0.12
UPF1-206ENST00000598471 RPS18P62269 152 aaKnown RBP14.33□□□□□ -0.12
UPF1-206ENST00000598471 AP2B1P63010 937 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 MRPS22P82650 360 aaKnown RBP14.33□□□□□ -0.12
UPF1-206ENST00000598471 PSG6Q00889 435 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 CAMK2BQ13554 666 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 EBPQ15125 230 aaKnown RBP14.33□□□□□ -0.12
UPF1-206ENST00000598471 CRB2Q5IJ48 1285 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 FAM69BQ5VUD6 431 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 NDUFAF7Q7L592 441 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 DTX1Q86Y01 620 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 C17orf47Q8NEP4 570 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 OR5L2Q8NGL0 311 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 OR8K3Q8NH51 312 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 RASSF5Q8WWW0 418 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 RMND5BQ96G75 393 aaPredicted RBP14.33□□□□□ -0.12
UPF1-206ENST00000598471 LCORQ96JN0 433 aaPredicted RBP14.33□□□□□ -0.12
UPF1-206ENST00000598471 IP6K3Q96PC2 410 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 TREX2Q9BQ50 279 aaPredicted RBP14.33□□□□□ -0.12
UPF1-206ENST00000598471 G6PC3Q9BUM1 346 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 WWTR1Q9GZV5 400 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 ANAPC2Q9UJX6 822 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 MRTO4Q9UKD2 239 aaKnown RBP14.33□□□□□ -0.12
UPF1-206ENST00000598471 DTX4Q9Y2E6 619 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 GPR55Q9Y2T6 319 aaPredicted RBP14.33□□□□□ -0.12
UPF1-206ENST00000598471 WDR45Q9Y484 360 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 KCNE3Q9Y6H6 103 aa14.33□□□□□ -0.12
UPF1-206ENST00000598471 TRBV11-1A0A0K0K1C0 115 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 TCRBV5S2A0A599 114 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 PEX12O00623 359 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 SOCS6O14544 535 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 SUV39H1O43463 412 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 MGRN1O60291 552 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 STX11O75558 287 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 CHRM4P08173 479 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 DRD5P21918 477 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 GPR143P51810 404 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 PSMD4P55036 377 aaKnown RBP14.32□□□□□ -0.12
UPF1-206ENST00000598471 FUT5Q11128 374 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 RIPK1Q13546 671 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 DECR1Q16698 335 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 BTBD16Q32M84 506 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 CYP27C1Q4G0S4 372 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 FAM98BQ52LJ0 330 aaKnown RBP14.32□□□□□ -0.12
UPF1-206ENST00000598471 CYBRD1Q53TN4 286 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 RPS26P11Q5JNZ5 115 aaPredicted RBP14.32□□□□□ -0.12
UPF1-206ENST00000598471 CBLL1Q75N03 491 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 EIF3MQ7L2H7 374 aaKnown RBP14.32□□□□□ -0.12
UPF1-206ENST00000598471 PPP1R32Q7Z5V6 425 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 C9orf40Q8IXQ3 194 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 APCDD1LQ8NCL9 501 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 OR11G2Q8NGC1 345 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 M1APQ8TC57 530 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 PIK3R3Q92569 461 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 PMM1Q92871 262 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 CBLCQ9ULV8 474 aa14.32□□□□□ -0.12
UPF1-206ENST00000598471 GXYLT2A0PJZ3 443 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 PRAMEF27A3QJZ7 478 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 TRABD2BA6NFA1 517 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 M0QX08 132 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 ACOX3O15254 700 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 ZFAND5O76080 213 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 KCNK2O95069 426 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 HPP00738 406 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 ALPPP05187 535 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 GUSBP08236 651 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 CT45A8P0DMV1 189 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 CT45A9P0DMV2 189 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 ICAM2P13598 275 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 SLC7A1P30825 629 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 KRT20P35900 424 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 PIGAP37287 484 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 RNF4P78317 190 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 CHRNB3Q05901 458 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 MAPK11Q15759 364 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 NNATQ16517 81 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 CT45A2Q5DJT8 189 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 PLAG1Q6DJT9 500 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 KIRREL2Q6UWL6 708 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 NPSR1Q6W5P4 371 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 ARMC8Q8IUR7 673 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 ZNF619Q8N2I2 560 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 NUBPLQ8TB37 319 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 SPPL2AQ8TCT8 520 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 TP53INP1Q96A56 240 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 HSPBAP1Q96EW2 488 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 DUS3LQ96G46 650 aaKnown RBP14.31□□□□□ -0.12
UPF1-206ENST00000598471 COL21A1Q96P44 957 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 SDF2Q99470 211 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 MESP1Q9BRJ9 268 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 DEFB126Q9BYW3 111 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 ZNF350Q9GZX5 532 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 SLC38A1Q9H2H9 487 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 DCLRE1BQ9H816 532 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 YY1AP1Q9H869 796 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 MTHFD2LQ9H903 347 aaPredicted RBP14.31□□□□□ -0.12
UPF1-206ENST00000598471 S100A14Q9HCY8 104 aa14.31□□□□□ -0.12
UPF1-206ENST00000598471 SEC14L3Q9UDX4 400 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms