RNA–Protein interactions for RNA: ENST00000597325.1

SHKBP1-213, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-213ENST00000597325 EXT1Q16394 746 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 SPATS1Q496A3 300 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 GCNT6Q5T4J0 391 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 MFSD12Q6NUT3 480 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 PPP1R32Q7Z5V6 425 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 SLC15A3Q8IY34 581 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 B3GNT7Q8NFL0 401 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 NCLNQ969V3 563 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 VMP1Q96GC9 406 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 SENP5Q96HI0 755 aaPredicted RBP11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 IP6K3Q96PC2 410 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 RAB3IPQ96QF0 476 aaPredicted RBP11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 CDRT15Q96T59 188 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 KCTD14Q9BQ13 255 aaPredicted RBP11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 SPATA9Q9BWV2 254 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 ACTRT3Q9BYD9 372 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 ZNF700Q9H0M5 742 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 OR10A5Q9H207 317 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 MMADHCQ9H3L0 296 aaPredicted RBP11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 IKZF5Q9H5V7 419 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 ANKRA2Q9H9E1 313 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 THUMPD1Q9NXG2 353 aaKnown RBP11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 LUZP4Q9P127 313 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 TMEM181Q9P2C4 612 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 ABCD2Q9UBJ2 740 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 ZNF639Q9UID6 485 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 ERVK-11Q9UQG0 969 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 HS3ST3B1Q9Y662 390 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 GMEB1Q9Y692 573 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 NBEAL1Q6ZS30 2694 aa11.17□□□□□ -0.62
SHKBP1-213ENST00000597325 SCN2AQ99250 2005 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 IGHV1-45A0A0A0MS14 117 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 ANKUB1A6NFN9 424 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 OR6C76A6NM76 312 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 PRSS44E7EML9 344 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 HRKO00198 91 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 SOCS6O14544 535 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 PDE5AO76074 875 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 STAMBPO95630 424 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 ALOX5P09917 674 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 COX6A1P12074 109 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 GPX2P18283 190 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 MATN1P21941 496 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 CASP9P55211 416 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 SLC26A5P58743 744 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 DSTNP60981 165 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 LIPEQ05469 1076 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 IL10RAQ13651 578 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 PCOLCEQ15113 449 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 RGNQ15493 299 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 BTBD16Q32M84 506 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 ATAD3BQ5T9A4 648 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 HLA-DQA1Q5Y7H0 255 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 TNFAIP8L2Q6P589 184 aaPredicted RBP11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 ZCCHC12Q6PEW1 402 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 ASRGL1Q7L266 308 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 NDUFAF7Q7L592 441 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 SLC29A4Q7RTT9 530 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 MRGPREQ86SM8 312 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 CDRT4Q8N9R6 151 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 TNIP2Q8NFZ5 429 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 OR2T12Q8NG77 320 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 OR1N1Q8NGS0 311 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 OR10A6Q8NH74 314 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 FBXO30Q8TB52 745 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 MIPOL1Q8TD10 442 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 ZNF721Q8TF20 911 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 SLC9A6Q92581 669 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 SNRNP40Q96DI7 357 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 YIPF4Q9BSR8 244 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 OR51I1Q9H343 314 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 ALG2Q9H553 416 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 EPS8L2Q9H6S3 715 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 KAT8Q9H7Z6 458 aaKnown RBP11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 FOLH1BQ9HBA9 442 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 GPATCH2Q9NW75 528 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 CMTM6Q9NX76 183 aa11.16□□□□□ -0.62
SHKBP1-213ENST00000597325 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 A0A1W2PQ72 361 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 TTC36A6NLP5 189 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 DUXAA6NLW8 204 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 FAM220BPB1ANY3 271 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 GSTA4O15217 222 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 GSC2O15499 205 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 ASNA1O43681 348 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 SOX30O94993 753 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 PSMG1O95456 288 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 AGR2O95994 175 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 HPP00738 406 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 IGKV3-11P04433 115 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 ETFAP13804 333 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 S1PR1P21453 382 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 GSK3BP49841 420 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 CLCN2P51788 898 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 SLC37A1P57057 533 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 AP2B1P63010 937 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 HPCAP84074 193 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 DUSP8Q13202 625 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 GNA13Q14344 377 aa11.15□□□□□ -0.62
SHKBP1-213ENST00000597325 COX20Q5RI15 118 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms