RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 SRD5A2P31213 254 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 PEX19P40855 299 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 MC3RP41968 323 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 KANK2Q63ZY3 851 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 TNIP2Q8NFZ5 429 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 AENQ8WTP8 325 aaKnown RBP16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 ELP4Q96EB1 424 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 EGLN2Q96KS0 407 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 CCT7Q99832 543 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 ZNF629Q9UEG4 869 aaPredicted RBP16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 TMED5Q9Y3A6 229 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 OR10H1Q9Y4A9 318 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 DNAJC15Q9Y5T4 150 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 DCHS2Q6V1P9 2916 aa16.32■□□□□ 0.2
CHMP2A-203ENST00000597209 MBD3L4A6NDZ8 208 aaPredicted RBP16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 MBD3L3A6NE82 208 aaPredicted RBP16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 MBD3L5A6NJ08 208 aaPredicted RBP16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 SYT5O00445 386 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 DVL2O14641 736 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 IL2RAP01589 272 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 TACR1P25103 407 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 GAS1P54826 345 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 KRTAP10-9P60411 292 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 ZNF155Q12901 538 aaPredicted RBP16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 DCST1Q5T197 706 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 WDR93Q6P2C0 686 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 EMBQ6PCB8 327 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 POMZP3Q6PJE2 187 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 TMEM107Q6UX40 140 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 WDR53Q7Z5U6 358 aaPredicted RBP16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 NAXEQ8NCW5 288 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 OR4N2Q8NGD1 307 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 OR2T11Q8NH01 316 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 MBD3L2Q8NHZ7 208 aaPredicted RBP16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 LMF2Q9BU23 707 aaKnown RBP16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 TUBB1Q9H4B7 451 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 EML4Q9HC35 981 aaKnown RBP16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 DDX18Q9NVP1 670 aaKnown RBP16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 PTGDR2Q9Y5Y4 395 aa16.31■□□□□ 0.2
CHMP2A-203ENST00000597209 INTS1Q8N201 2190 aaKnown RBP16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 SERPINB5P36952 375 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 GFRA1P56159 465 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 DLX5P56178 289 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 IFFO1Q0D2I5 559 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 UGT3A2Q3SY77 523 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 FBXL19-AS1Q494R0 122 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 CES4AQ5XG92 561 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 ENPP6Q6UWR7 440 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 RELL2Q8NC24 303 aaPredicted RBP16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 OR14L1PQ8NHC6 308 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 CAVIN3Q969G5 261 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 EFHD2Q96C19 240 aaPredicted RBP16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 FAM111AQ96PZ2 611 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 UCN2Q96RP3 112 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 ZNF559Q9BR84 538 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 TMEM109Q9BVC6 243 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 REEP4Q9H6H4 257 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 Q9N2J8 555 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 SLC17A7Q9P2U7 560 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 MRTO4Q9UKD2 239 aaKnown RBP16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 CBLCQ9ULV8 474 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 ABCG2Q9UNQ0 655 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 L3MBTL1Q9Y468 752 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 TRAF6Q9Y4K3 522 aa16.3■□□□□ 0.2
CHMP2A-203ENST00000597209 KDM4EB2RXH2 506 aaPredicted RBP16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 LSM1O15116 133 aaKnown RBP16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 PDPK1O15530 556 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 FADS1O60427 444 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 IL33O95760 270 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 CYP4B1P13584 511 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 SDC1P18827 310 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 GRK2P25098 689 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 FRKP42685 505 aaPredicted RBP16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 ASCL1P50553 236 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 GAB1Q13480 694 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 PDE7AQ13946 482 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 RCAN2Q14206 197 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 ZNHIT3Q15649 155 aaPredicted RBP16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 DECR1Q16698 335 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 RFTN2Q52LD8 501 aaPredicted RBP16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 ARL13AQ5H913 290 aaPredicted RBP16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 ARSKQ6UWY0 536 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 ADGRE4PQ86SQ3 457 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 IFNEQ86WN2 208 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 TRIM42Q8IWZ5 723 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 TCP10LQ8TDR4 215 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 HOXB13Q92826 284 aaPredicted RBP16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 MTERF3Q96E29 417 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 LRRC46Q96FV0 321 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 TRIB1Q96RU8 372 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 C3orf14Q9HBI5 128 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 SDHAF3Q9NRP4 125 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 TAS2R10Q9NYW0 307 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 FOXD3Q9UJU5 478 aaPredicted RBP16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 FBXL2Q9UKC9 423 aa16.29■□□□□ 0.2
CHMP2A-203ENST00000597209 IL18BPO95998 194 aa16.28■□□□□ 0.2
CHMP2A-203ENST00000597209 CHRNGP07510 517 aa16.28■□□□□ 0.2
CHMP2A-203ENST00000597209 LINC00032P0C843 101 aa16.28■□□□□ 0.2
CHMP2A-203ENST00000597209 PRPS2P11908 318 aa16.28■□□□□ 0.2
CHMP2A-203ENST00000597209 CHMP24386 653 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms