RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 NOXRED1Q6NXP6 359 aa16.36■□□□□ 0.21
HOMER3-208ENST00000595756 LACC1Q8IV20 430 aa16.36■□□□□ 0.21
HOMER3-208ENST00000595756 LRRC34Q8IZ02 419 aa16.36■□□□□ 0.21
HOMER3-208ENST00000595756 PRR22Q8IZ63 422 aa16.36■□□□□ 0.21
HOMER3-208ENST00000595756 SAMD14Q8IZD0 417 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-208ENST00000595756 MMP21Q8N119 569 aa16.36■□□□□ 0.21
HOMER3-208ENST00000595756 ZNF395Q9H8N7 513 aaPredicted RBP16.36■□□□□ 0.21
HOMER3-208ENST00000595756 ZFHX3Q15911 3703 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 ZNF469Q96JG9 3925 aaPredicted RBP16.35■□□□□ 0.21
HOMER3-208ENST00000595756 TRPC5OSA6NMA1 111 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 DVL2O14641 736 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 TRAPPC6AO75865 159 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 EPPINO95925 133 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 CBX7O95931 251 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 PCSK2P16519 638 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 PTPN6P29350 595 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 TIMP3P35625 211 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 SOX18P35713 384 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 FEN1P39748 380 aaKnown RBP16.35■□□□□ 0.21
HOMER3-208ENST00000595756 DLX5P56178 289 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 DCAF7P61962 342 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 OCRLQ01968 901 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 DUSP2Q05923 314 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 PLCXD2Q0VAA5 305 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 EXOSC7Q15024 291 aaKnown RBP16.35■□□□□ 0.21
HOMER3-208ENST00000595756 SF3B4Q15427 424 aaKnown RBP eCLIP16.35■□□□□ 0.21
HOMER3-208ENST00000595756 NNATQ16517 81 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 FAM219BQ5XKK7 198 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 VASNQ6EMK4 673 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 FAM111BQ6SJ93 734 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 IKBIPQ70UQ0 350 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 RELL2Q8NC24 303 aaPredicted RBP16.35■□□□□ 0.21
HOMER3-208ENST00000595756 PIWIL2Q8TC59 973 aaKnown RBP16.35■□□□□ 0.21
HOMER3-208ENST00000595756 ZNF675Q8TD23 568 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 C16orf78Q8WTQ4 265 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 HGDQ93099 445 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 TUBGCP3Q96CW5 907 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 OMA1Q96E52 524 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 CNRIP1Q96F85 164 aaPredicted RBP16.35■□□□□ 0.21
HOMER3-208ENST00000595756 LCORQ96JN0 433 aaPredicted RBP16.35■□□□□ 0.21
HOMER3-208ENST00000595756 C7orf26Q96N11 449 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 ZNF681Q96N22 645 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 GNRHR2Q96P88 292 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 TIMP4Q99727 224 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 OSBPL11Q9BXB4 747 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 METTL7AQ9H8H3 244 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 EHD3Q9NZN3 535 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 PRODH2Q9UF12 536 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 BCAP29Q9UHQ4 241 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 DLGAP4Q9Y2H0 992 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 ZNF780BQ9Y6R6 833 aa16.35■□□□□ 0.21
HOMER3-208ENST00000595756 C2CD3Q4AC94 2353 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 SNPHO15079 494 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 HDAC3O15379 428 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 DDX5P17844 614 aaKnown RBP16.34■□□□□ 0.21
HOMER3-208ENST00000595756 CEACAM8P31997 349 aaPredicted RBP16.34■□□□□ 0.21
HOMER3-208ENST00000595756 ASMTP46597 345 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 ALDH9A1P49189 494 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 ASCL1P50553 236 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 RPL38P63173 70 aaKnown RBP16.34■□□□□ 0.21
HOMER3-208ENST00000595756 SNTA1Q13424 505 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 PDCD2Q16342 344 aaPredicted RBP16.34■□□□□ 0.21
HOMER3-208ENST00000595756 FBXL19-AS1Q494R0 122 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 GALNTL6Q49A17 601 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 TIGD3Q6B0B8 471 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 SLC30A6Q6NXT4 461 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 ARSKQ6UWY0 536 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 NUP54Q7Z3B4 507 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 NAXEQ8NCW5 288 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 OR52R1Q8NGF1 315 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 OR2T11Q8NH01 316 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 CKAP2Q8WWK9 683 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 ERP27Q96DN0 273 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 FCRL1Q96LA6 429 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 MAGEB18Q96M61 343 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 MYNNQ9NPC7 610 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 UTS2RQ9UKP6 389 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 POLR3HQ9Y535 204 aaPredicted RBP16.34■□□□□ 0.21
HOMER3-208ENST00000595756 PTGDR2Q9Y5Y4 395 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 MED13LQ71F56 2210 aa16.34■□□□□ 0.21
HOMER3-208ENST00000595756 KIAA1549Q9HCM3 1950 aa16.33■□□□□ 0.21
HOMER3-208ENST00000595756 DOCK7Q96N67 2140 aa16.33■□□□□ 0.21
HOMER3-208ENST00000595756 VPS13CQ709C8 3753 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 FRG2CA6NGY1 282 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 TO15178 435 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 PEX11AO75192 247 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 IL3P08700 152 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 PRPS2P11908 318 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 EMDP50402 254 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 RIPPLY3P57055 190 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 LTB4RQ15722 352 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 RFTN2Q52LD8 501 aaPredicted RBP16.33■□□□□ 0.2
HOMER3-208ENST00000595756 ZNF628Q5EBL2 1059 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 C6orf136Q5SQH8 315 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 NSUN5P2Q63ZY6 315 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 ANGPTL8Q6UXH0 198 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 FAM9CQ8IZT9 166 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 ADCY4Q8NFM4 1077 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 TNIP2Q8NFZ5 429 aa16.33■□□□□ 0.2
HOMER3-208ENST00000595756 OR1J4Q8NGS1 313 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms