RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 LMF2Q9BU23 707 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 ANKRA2Q9H9E1 313 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 ATAD3AQ9NVI7 634 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 SH3BP4Q9P0V3 963 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 ABCG2Q9UNQ0 655 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 MAPRE3Q9UPY8 281 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 WIF1Q9Y5W5 379 aa16.21■□□□□ 0.19
SHKBP1-204ENST00000594862 DNAJC13O75165 2243 aa16.21■□□□□ 0.18
SHKBP1-204ENST00000594862 AHRRA9YTQ3 701 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 UPK1AO00322 258 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 GNB5O14775 395 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 AKAP10O43572 662 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 ACTL6AO96019 429 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 FRKP42685 505 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 CLK3P49761 638 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 MANFP55145 182 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 NUP107P57740 925 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 PSG6Q00889 435 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 HSPB3Q12988 150 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 MLC1Q15049 377 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 SMU1Q2TAY7 513 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 TNFAIP8L3Q5GJ75 292 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 NCCRP1Q6ZVX7 275 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 GFM2Q969S9 779 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 GNRHR2Q96P88 292 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 MS4A4EQ96PG1 132 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 PRPF18Q99633 342 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 TTYH2Q9BSA4 534 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 SDHAF3Q9NRP4 125 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 RNF6Q9Y252 685 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 EIF3LQ9Y262 564 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 HRH3Q9Y5N1 445 aa16.2■□□□□ 0.18
SHKBP1-204ENST00000594862 CSMD1Q96PZ7 3565 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 NINQ8N4C6 2090 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 SCAMP2O15127 329 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 PEX11AO75192 247 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 SKAP2O75563 359 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 KCNH1O95259 989 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 DHRS4L1P0CG22 281 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 GRNP28799 593 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 PTGDSP41222 190 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 TRPC1P48995 793 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 PRR5P85299 388 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 CRYZQ08257 329 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 PMPCAQ10713 525 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 CHI3L2Q15782 390 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 PRSS53Q2L4Q9 553 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 C6orf136Q5SQH8 315 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 RIPPLY2Q5TAB7 128 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 PLCZ1Q86YW0 608 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 ULK2Q8IYT8 1036 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 CDRT4Q8N9R6 151 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 FNDC5Q8NAU1 212 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 LILRB4Q8NHJ6 448 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 RNF138Q8WVD3 245 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 TUBGCP3Q96CW5 907 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 OR2B2Q9GZK3 357 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 PRDM14Q9GZV8 571 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 KCNJ16Q9NPI9 418 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 NTMQ9P121 344 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 ATP6V1HQ9UI12 483 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 ZDHHC2Q9UIJ5 367 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 CBLCQ9ULV8 474 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 RAP2CQ9Y3L5 183 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 FAM215AQ9Y5M1 114 aa16.19■□□□□ 0.18
SHKBP1-204ENST00000594862 ABCA12Q86UK0 2595 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 NCKAP5O14513 1909 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 GLI4P10075 376 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 PRPS1L1P21108 318 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 SRD5A2P31213 254 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 ABCE1P61221 599 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 VASNQ6EMK4 673 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 ANKRD26P1Q6NSI1 321 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 ZCCHC12Q6PEW1 402 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 ZNF551Q7Z340 670 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 GDF7Q7Z4P5 450 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 LRRC34Q8IZ02 419 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 FAM83FQ8NEG4 500 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 OR10Q1Q8NGQ4 319 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 CLHC1Q8NHS4 586 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 CIDECQ96AQ7 238 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 EFHD2Q96C19 240 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 PKNOX2Q96KN3 472 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 SPOCK3Q9BQ16 436 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 SLC24A3Q9HC58 644 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 GALNT9Q9HCQ5 603 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 KCNK9Q9NPC2 374 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 FAM120CQ9NX05 1096 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 ALKBH4Q9NXW9 302 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 ASIC5Q9NY37 505 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 NOP53Q9NZM5 478 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 BAIAP2L1Q9UHR4 511 aa16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 MRPS18CQ9Y3D5 142 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-204ENST00000594862 PCNX1Q96RV3 2341 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 HSPB2A8KAH6 182 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 EMC8O43402 210 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 SOX30O94993 753 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 IL33O95760 270 aa16.17■□□□□ 0.18
SHKBP1-204ENST00000594862 ARRB2P32121 409 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms