RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 WNT2BQ93097 391 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 NTNG2Q96CW9 530 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 TMCO6Q96DC7 493 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 KCNA7Q96RP8 456 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 C12orf65Q9H3J6 166 aaKnown RBP13.38□□□□□ -0.27
PNKP-202ENST00000593706 PIGMQ9H3S5 423 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 ZNF395Q9H8N7 513 aaPredicted RBP13.38□□□□□ -0.27
PNKP-202ENST00000593706 PFDN4Q9NQP4 134 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 MKS1Q9NXB0 559 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 TAS2R10Q9NYW0 307 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 CLCF1Q9UBD9 225 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 PRODH2Q9UF12 536 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 DKKL1Q9UK85 242 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 PSME2Q9UL46 239 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 EXO1Q9UQ84 846 aaKnown RBP13.38□□□□□ -0.27
PNKP-202ENST00000593706 STK38LQ9Y2H1 464 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 PCDHA9Q9Y5H5 950 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 ZNF780BQ9Y6R6 833 aa13.38□□□□□ -0.27
PNKP-202ENST00000593706 SERTM1A2A2V5 107 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 SMIM23A6NLE4 172 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 SMNDC1O75940 238 aaKnown RBP eCLIP13.37□□□□□ -0.27
PNKP-202ENST00000593706 TCEA1P23193 301 aaKnown RBP13.37□□□□□ -0.27
PNKP-202ENST00000593706 PTGDSP41222 190 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 FOXA1P55317 472 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 DNAJB13P59910 316 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 RAE1P78406 368 aaKnown RBP13.37□□□□□ -0.27
PNKP-202ENST00000593706 MAP4K2Q12851 820 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 GAB1Q13480 694 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 LTB4RQ15722 352 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 Q5PR19 223 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 SHEQ5VZ18 495 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 WDR93Q6P2C0 686 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 P4HA3Q7Z4N8 544 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 P3H2Q8IVL5 708 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 C1orf52Q8N6N3 182 aaKnown RBP13.37□□□□□ -0.27
PNKP-202ENST00000593706 WDSUB1Q8N9V3 476 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 SIMC1Q8NDZ2 872 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 OR52R1Q8NGF1 315 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 OR2W6PQ8NHA6 318 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 TMBIM1Q969X1 311 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 TM4SF18Q96CE8 201 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 CCDC126Q96EE4 140 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 SFXN2Q96NB2 322 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 FAIM2Q9BWQ8 316 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 TNFRSF12AQ9NP84 129 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 VPS29Q9UBQ0 182 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 LGALS13Q9UHV8 139 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 WIF1Q9Y5W5 379 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 HIVEP2P31629 2446 aa13.37□□□□□ -0.27
PNKP-202ENST00000593706 A0A1W2PPR1 153 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 FRG2CA6NGY1 282 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 OR6C70A6NIJ9 312 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 FAM171A2A8MVW0 826 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 PLOD2O00469 737 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 REM1O75628 298 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 CBX7O95931 251 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 KRT6AP02538 564 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 KRT6BP04259 564 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 MYL2P10916 166 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 KRT4P19013 534 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 CHMP24386 653 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 IL12BP29460 328 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 SRD5A2P31213 254 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 KRT20P35900 424 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 PPICP45877 212 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 KRT6CP48668 564 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 STARP49675 285 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 GFRA1P56159 465 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 EEF1A1P68104 462 aaKnown RBP13.36□□□□□ -0.27
PNKP-202ENST00000593706 MRPS35P82673 323 aaKnown RBP13.36□□□□□ -0.27
PNKP-202ENST00000593706 MGAT2Q10469 447 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 CCDC153Q494R4 210 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 EEF1A1P5Q5VTE0 462 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 FAM180BQ6P0A1 224 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 GALNT18Q6P9A2 607 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 ADGRE4PQ86SQ3 457 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 PLCZ1Q86YW0 608 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 KRTAP1-3Q8IUG1 177 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 GBP7Q8N8V2 638 aaPredicted RBP13.36□□□□□ -0.27
PNKP-202ENST00000593706 CNEP1R1Q8N9A8 125 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 METTL6Q8TCB7 284 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 CAVIN3Q969G5 261 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 COL21A1Q96P44 957 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 OXSMQ9NWU1 459 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 ZNF639Q9UID6 485 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 TESMINQ9Y4I5 508 aa13.36□□□□□ -0.27
PNKP-202ENST00000593706 RTTNQ86VV8 2226 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 A8MXE2 369 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 SMPD2O60906 423 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 ABCB7O75027 752 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 ULK1O75385 1050 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 HEXAP06865 529 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 PCSK2P16519 638 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 DRD5P21918 477 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 CCT5P48643 541 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 EMDP50402 254 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 LHX2P50458 406 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 TRA2BP62995 288 aaKnown RBP13.35□□□□□ -0.27
PNKP-202ENST00000593706 HMGCS1Q01581 520 aa13.35□□□□□ -0.27
PNKP-202ENST00000593706 DUSP2Q05923 314 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms