RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 ZNF474Q6S9Z5 364 aaPredicted RBP14.78□□□□□ -0.04
LIG1-205ENST00000593425 LARP4Q71RC2 724 aaKnown RBP eCLIP14.78□□□□□ -0.04
LIG1-205ENST00000593425 UBQLNLQ8IYU4 475 aa14.78□□□□□ -0.04
LIG1-205ENST00000593425 CIARTQ8N365 385 aaPredicted RBP14.78□□□□□ -0.04
LIG1-205ENST00000593425 C17orf53Q8N3J3 647 aaPredicted RBP14.78□□□□□ -0.04
LIG1-205ENST00000593425 CDYL2Q8N8U2 506 aa14.78□□□□□ -0.04
LIG1-205ENST00000593425 MRPL57Q9BQC6 102 aaKnown RBP14.78□□□□□ -0.04
LIG1-205ENST00000593425 VPS29Q9UBQ0 182 aa14.78□□□□□ -0.04
LIG1-205ENST00000593425 MANBAO00462 879 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 SCO2O43819 266 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 PCDH7O60245 1069 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 BCAS2O75934 225 aaPredicted RBP14.77□□□□□ -0.05
LIG1-205ENST00000593425 LY6G6DO95868 133 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 COL6A2P12110 1019 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 HSD17B3P37058 310 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 HTR6P50406 440 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 PNLIPRP2P54317 469 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 CLDN15P56746 228 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 EEF1A1P68104 462 aaKnown RBP14.77□□□□□ -0.05
LIG1-205ENST00000593425 CLCQ05315 142 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 EEF1A1P5Q5VTE0 462 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 SYT10Q6XYQ8 523 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 BTLAQ7Z6A9 289 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 RELL1Q8IUW5 271 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 SLC44A2Q8IWA5 706 aaPredicted RBP14.77□□□□□ -0.05
LIG1-205ENST00000593425 CNEP1R1Q8N9A8 125 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 OR7G2Q8NG99 324 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 OR4K17Q8NGC6 315 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 FIG4Q92562 907 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 ERP27Q96DN0 273 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 COX4I2Q96KJ9 171 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 FAM111AQ96PZ2 611 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 OPN3Q9H1Y3 402 aaPredicted RBP14.77□□□□□ -0.05
LIG1-205ENST00000593425 DSN1Q9H410 356 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 NMRK1Q9NWW6 199 aa14.77□□□□□ -0.05
LIG1-205ENST00000593425 SLC22A20A6NK97 555 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 TRIM49D1C9J1S8 452 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 POC1B-GALNT4F8VUJ3 575 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 H0YC42 278 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 ARHGEF9O43307 516 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 SMPD2O60906 423 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 CRHP06850 196 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 HSD3B1P14060 373 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 HSD3B2P26439 372 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 KRT20P35900 424 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 CD79BP40259 229 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 MC3RP41968 323 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 KIR2DL2P43627 348 aaPredicted RBP14.76□□□□□ -0.05
LIG1-205ENST00000593425 SERPINB9P50453 376 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 SUCLG1P53597 346 aaKnown RBP14.76□□□□□ -0.05
LIG1-205ENST00000593425 TPD52P55327 224 aaPredicted RBP14.76□□□□□ -0.05
LIG1-205ENST00000593425 DSCR4P56555 118 aaPredicted RBP14.76□□□□□ -0.05
LIG1-205ENST00000593425 SIRPAP78324 504 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 CSTF3Q12996 717 aaKnown RBP14.76□□□□□ -0.05
LIG1-205ENST00000593425 BCL2A1Q16548 175 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 ERCC6LQ2NKX8 1250 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 UNC50Q53HI1 259 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 ZNF550Q7Z398 422 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 P3H2Q8IVL5 708 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 LRRC75A-AS1Q8N1F1 130 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 GBP7Q8N8V2 638 aaPredicted RBP14.76□□□□□ -0.05
LIG1-205ENST00000593425 FADS6Q8N9I5 356 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 OR2M3Q8NG83 312 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 DCAKDQ8WVC6 231 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 MTBPQ96DY7 904 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 DTNBP1Q96EV8 351 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 PIK3IP1Q96FE7 263 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 PGM2Q96G03 612 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 APIPQ96GX9 242 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 HS3ST6Q96QI5 342 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 PIP5K1AQ99755 562 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 ACPTQ9BZG2 426 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 UBTD1Q9HAC8 227 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 FLRT3Q9NZU0 649 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 PPP4R1LQ9P1A2 415 aa14.76□□□□□ -0.05
LIG1-205ENST00000593425 PCNX3Q9H6A9 2034 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 GNG14A0A1W2PPG7 69 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 H7C1Q1 480 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 SEC14L5O43304 696 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 SUPT7LO94864 414 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 KRT6AP02538 564 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 KRT6BP04259 564 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 PEPDP12955 493 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 CRYGSP22914 178 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 EVI2BP34910 448 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 KRT6CP48668 564 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 PCYT1AP49585 367 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 ETF1P62495 437 aaKnown RBP14.75□□□□□ -0.05
LIG1-205ENST00000593425 PSG6Q00889 435 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 RASA2Q15283 850 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 PRSS53Q2L4Q9 553 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 TEX35Q5T0J7 233 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 RAET1LQ5VY80 246 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 OR2A2Q6IF42 318 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 TAOK1Q7L7X3 1001 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 CHMP1BQ7LBR1 199 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 OR5M1Q8NGP8 315 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 C16orf78Q8WTQ4 265 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 PIGTQ969N2 578 aa14.75□□□□□ -0.05
LIG1-205ENST00000593425 Q96MF0 132 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms