RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 MICU2Q8IYU8 434 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 CCDC116Q8IYX3 515 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 BHLHE22Q8NFJ8 381 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-219ENST00000592927 OR14A16Q8NHC5 309 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 SUN3Q8TAQ9 357 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 RIT1Q92963 219 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 IMMP1LQ96LU5 166 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 TRIM8Q9BZR9 551 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 PCDHAC1Q9H158 963 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 ING2Q9H160 280 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 EPS8L2Q9H6S3 715 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 GORASP2Q9H8Y8 452 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 C3orf14Q9HBI5 128 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 SIRT3Q9NTG7 399 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-219ENST00000592927 THUMPD1Q9NXG2 353 aaKnown RBP11.04□□□□□ -0.64
DDX39A-219ENST00000592927 KCNMB2Q9Y691 235 aa11.04□□□□□ -0.64
DDX39A-219ENST00000592927 A0A1W2PS29 197 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 TCRBV3S1A0A5B6 114 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 MASP2O00187 686 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 PLOD2O00469 737 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 ARPC2O15144 300 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 EMC8O43402 210 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 ATP1B1P05026 303 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 C8BP07358 591 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 UMPSP11172 480 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 HOXB6P17509 224 aaKnown RBP11.03□□□□□ -0.64
DDX39A-219ENST00000592927 GGT1P19440 569 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 NT5EP21589 574 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 GALNSP34059 522 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 CCT3P49368 545 aaKnown RBP11.03□□□□□ -0.64
DDX39A-219ENST00000592927 CDK9P50750 372 aaKnown RBP11.03□□□□□ -0.64
DDX39A-219ENST00000592927 ANXA11P50995 505 aaKnown RBP11.03□□□□□ -0.64
DDX39A-219ENST00000592927 PGDP52209 483 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 SLC26A5P58743 744 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 CHAF1BQ13112 559 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 VEZF1Q14119 521 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 SPDYE7PQ495Y7 208 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 FBXW10Q5XX13 1052 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 PLAG1Q6DJT9 500 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 GLYATQ6IB77 296 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 SPATA24Q86W54 205 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 APLFQ8IW19 511 aaPredicted RBP11.03□□□□□ -0.64
DDX39A-219ENST00000592927 SLC30A8Q8IWU4 369 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 KBTBD2Q8IY47 623 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 MORN4Q8NDC4 146 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 B3GNT7Q8NFL0 401 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 OR56A1Q8NGH5 318 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 M1APQ8TC57 530 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 SLC26A7Q8TE54 656 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 PTPMT1Q8WUK0 201 aaPredicted RBP11.03□□□□□ -0.64
DDX39A-219ENST00000592927 DUS3LQ96G46 650 aaKnown RBP11.03□□□□□ -0.64
DDX39A-219ENST00000592927 RSRC1Q96IZ7 334 aaKnown RBP11.03□□□□□ -0.64
DDX39A-219ENST00000592927 NSMCE2Q96MF7 247 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 RNPEPL1Q9HAU8 725 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 NTMQ9P121 344 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 PTGFRNQ9P2B2 879 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 EGFL7Q9UHF1 273 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 ITGB1BP2Q9UKP3 347 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 SNX8Q9Y5X2 465 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 HIVEP1P15822 2718 aa11.03□□□□□ -0.64
DDX39A-219ENST00000592927 AKAP9Q99996 3911 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 SERPINA7P05543 415 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 GPIP06744 558 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 BMP2P12643 396 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 ITGA3P26006 1051 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 CCL11P51671 97 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 MVDP53602 400 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 DUSP2Q05923 314 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 ZNF267Q14586 743 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-219ENST00000592927 SNCBQ16143 134 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 VMACQ2NL98 169 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 ANGPTL8Q6UXH0 198 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 DGAT2L6Q6ZPD8 337 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 C6orf120Q7Z4R8 191 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 GALNT12Q8IXK2 581 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 GALNT16Q8N428 558 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 NFAM1Q8NET5 270 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-219ENST00000592927 SLC2A12Q8TD20 617 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 ZNF675Q8TD23 568 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 DOK4Q8TEW6 326 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 ELP4Q96EB1 424 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 VMP1Q96GC9 406 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 SENP5Q96HI0 755 aaPredicted RBP11.02□□□□□ -0.65
DDX39A-219ENST00000592927 THOC3Q96J01 351 aaKnown RBP11.02□□□□□ -0.65
DDX39A-219ENST00000592927 ART5Q96L15 291 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 CNPPD1Q9BV87 410 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 OR8D2Q9GZM6 311 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 LHPPQ9H008 270 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 PIF1Q9H611 641 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 TMEM38AQ9H6F2 299 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 CXorf21Q9HAI6 301 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 S100A14Q9HCY8 104 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 MMP25Q9NPA2 562 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 GMPR2Q9P2T1 348 aaKnown RBP11.02□□□□□ -0.65
DDX39A-219ENST00000592927 STX18Q9P2W9 335 aaKnown RBP11.02□□□□□ -0.65
DDX39A-219ENST00000592927 COPS7AQ9UBW8 275 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 CCDC88CQ9P219 2028 aa11.02□□□□□ -0.65
DDX39A-219ENST00000592927 CSMD2Q7Z408 3487 aa11.01□□□□□ -0.65
DDX39A-219ENST00000592927 A0A087WV62 115 aa11.01□□□□□ -0.65
DDX39A-219ENST00000592927 A6NL46 340 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms