RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PPP1R3AQ16821 1122 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 CR1LQ2VPA4 569 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 TTC19Q6DKK2 380 aaPredicted RBP5.48□□□□□ -1.53
VPS25-204ENST00000589577 ABHD17CQ6PCB6 329 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 LCTLQ6UWM7 567 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 TREML4Q6UXN2 200 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 THOC6Q86W42 341 aaKnown RBP5.48□□□□□ -1.53
VPS25-204ENST00000589577 TEX9Q8N6V9 391 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 CNEP1R1Q8N9A8 125 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 MORN4Q8NDC4 146 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 FAM13CQ8NE31 585 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 FAM83FQ8NEG4 500 aaPredicted RBP5.48□□□□□ -1.53
VPS25-204ENST00000589577 TTLQ8NG68 377 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 NT5CQ8TCD5 201 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 ZNF721Q8TF20 911 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 UBTD2Q8WUN7 234 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 HTRA1Q92743 480 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 RHBDF1Q96CC6 855 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 C11orf24Q96F05 449 aaPredicted RBP5.48□□□□□ -1.53
VPS25-204ENST00000589577 RILPQ96NA2 401 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 AIF1LQ9BQI0 150 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 SOX7Q9BT81 388 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 EFCAB11Q9BUY7 163 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 CD244Q9BZW8 370 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 OR8D2Q9GZM6 311 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 KLHL31Q9H511 634 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 CLK4Q9HAZ1 481 aaKnown RBP5.48□□□□□ -1.53
VPS25-204ENST00000589577 PRTFDC1Q9NRG1 225 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 OXSMQ9NWU1 459 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 GPRC5BQ9NZH0 403 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 SLC17A7Q9P2U7 560 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 ADAMTS6Q9UKP5 1117 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 MAPRE3Q9UPY8 281 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 CLCA3PQ9Y6N3 262 aa5.48□□□□□ -1.53
VPS25-204ENST00000589577 A0A1W2PP18 115 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 ANKRD33BA6NCL7 494 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 URADA6NGE7 173 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 SLCO1B7G3V0H7 640 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 HRKO00198 91 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 OR1F1O43749 312 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 DLX3O60479 287 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 NPHS1O60500 1241 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 UGDHO60701 494 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 KRT6AP02538 564 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 KRT6BP04259 564 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 ENO1P06733 434 aaKnown RBP5.47□□□□□ -1.53
VPS25-204ENST00000589577 CRHP06850 196 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 TROVE2P10155 538 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS25-204ENST00000589577 CREB1P16220 341 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 SLC25A16P16260 332 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 PTNP21246 168 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 TBXA2RP21731 343 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 USF1P22415 310 aaPredicted RBP5.47□□□□□ -1.53
VPS25-204ENST00000589577 GMPRP36959 345 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 HNF4AP41235 474 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 KRT6CP48668 564 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 GZMKP49863 264 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 CCR8P51685 355 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 NUDT6P53370 316 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 PKNOX1P55347 436 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 SKP1P63208 163 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 EEF1A1P68104 462 aaKnown RBP5.47□□□□□ -1.53
VPS25-204ENST00000589577 SIRPAP78324 504 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 IRX1P78414 480 aaPredicted RBP5.47□□□□□ -1.53
VPS25-204ENST00000589577 LSM11P83369 360 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS25-204ENST00000589577 CLCQ05315 142 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 FUT7Q11130 342 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 TBL3Q12788 808 aaKnown RBP5.47□□□□□ -1.53
VPS25-204ENST00000589577 LCP2Q13094 533 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 IFT88Q13099 833 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 SLC13A2Q13183 592 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 GTF2H2Q13888 395 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 RCN2Q14257 317 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 PCLAFQ15004 111 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 GUSBP1Q15486 140 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 NTRK2Q16620 822 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 NRF1Q16656 503 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 ZNF672Q499Z4 452 aaPredicted RBP5.47□□□□□ -1.53
VPS25-204ENST00000589577 EEF1A1P5Q5VTE0 462 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 NIPAL1Q6NVV3 410 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 GTF2H2CQ6P1K8 395 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 CLEC2AQ6UVW9 174 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 DNAJC14Q6Y2X3 702 aaPredicted RBP5.47□□□□□ -1.53
VPS25-204ENST00000589577 STAC2Q6ZMT1 411 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 MBOAT1Q6ZNC8 495 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 GPRIN3Q6ZVF9 776 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 TMPRSS11BQ86T26 416 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 YRDCQ86U90 279 aaKnown RBP5.47□□□□□ -1.53
VPS25-204ENST00000589577 DTX2Q86UW9 622 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 WFDC8Q8IUA0 241 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 GRAMD2AQ8IUY3 354 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 C10orf107Q8IVU9 208 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 WDR75Q8IWA0 830 aaKnown RBP5.47□□□□□ -1.53
VPS25-204ENST00000589577 TMEM132CQ8N3T6 1108 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 ANKRD53Q8N9V6 530 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 ZNF610Q8N9Z0 462 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 FAM47BQ8NA70 645 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 ABHD11Q8NFV4 315 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 KBTBD8Q8NFY9 601 aa5.47□□□□□ -1.53
VPS25-204ENST00000589577 OR4K1Q8NGD4 311 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms