RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 EFHD2Q96C19 240 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 RMND5BQ96G75 393 aaPredicted RBP17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 SLC35A4Q96G79 324 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 STACQ99469 402 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 OR51I1Q9H343 314 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 PIGUQ9H490 435 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 KLHL1Q9NR64 748 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 DUSP22Q9NRW4 184 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 RYDENQ9NUL5 291 aaKnown RBP17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 RALYQ9UKM9 306 aaKnown RBP17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 KCNE3Q9Y6H6 103 aa17.47■□□□□ 0.39
CLPTM1-209ENST00000588855 TRBV5-3A0A0A0MS03 114 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 CAPN14A8MX76 684 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 NDUFAB1O14561 156 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 TSPAN2O60636 221 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 REM1O75628 298 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 PIGAP37287 484 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 PSPHP78330 225 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 MRPS22P82650 360 aaKnown RBP17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 KLRB1Q12918 225 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 NFATC3Q12968 1075 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 PLEKHN1Q494U1 663 aaPredicted RBP17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 CYP27C1Q4G0S4 372 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 ZNF766Q5HY98 468 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 COX20Q5RI15 118 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 REP15Q6BDI9 236 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 DLEU7Q6UYE1 221 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 GALNT10Q86SR1 603 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 DND1Q8IYX4 353 aaKnown RBP17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 HORMAD2Q8N7B1 307 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 BCORP1Q8N888 145 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 ANKS4BQ8N8V4 417 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 CCDC197Q8NCU1 140 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 MIPOL1Q8TD10 442 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 BCAS4Q8TDM0 211 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 PNPLA2Q96AD5 504 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 SCMH1Q96GD3 660 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 TPT1P8Q9HAU6 139 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 VAPAQ9P0L0 249 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 MAP10Q9P2G4 905 aa17.46■□□□□ 0.39
CLPTM1-209ENST00000588855 CFAP46Q8IYW2 2715 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 BBIP1A8MTZ0 92 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 UGT2B11O75310 529 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 DCTN3O75935 186 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 KRT75O95678 551 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 IGKV1D-16P01601 117 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 SP1P08047 785 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 CCL3P10147 92 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 COX4I1P13073 169 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 CD46P15529 392 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 NAGAP17050 411 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 IL12BP29460 328 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 KRT20P35900 424 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 RFX3P48380 749 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 MVDP53602 400 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 POU6F2P78424 691 aaPredicted RBP17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 NFYCQ13952 458 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 CYLC2Q14093 348 aaPredicted RBP17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 DECR1Q16698 335 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 Q8NA96 180 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 GOLM1Q8NBJ4 401 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 PSD4Q8NDX1 1056 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 HGDQ93099 445 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 TMEM125Q96AQ2 219 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 SGCZQ96LD1 299 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 C5orf34Q96MH7 638 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 ADOQ96SZ5 270 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 IL1RL2Q9HB29 575 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 SH2D2AQ9NP31 389 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 GIN1Q9NXP7 522 aa17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 CHCHD2Q9Y6H1 151 aaPredicted RBP17.45■□□□□ 0.38
CLPTM1-209ENST00000588855 OR6C70A6NIJ9 312 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 MRASO14807 208 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 KCNK2O95069 426 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 KHKP50053 298 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 MMEL1Q495T6 779 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 COQ5Q5HYK3 327 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.44■□□□□ 0.387e-15■■■■■ 44.4
CLPTM1-209ENST00000588855 CCNJQ5T5M9 372 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 SLC25A25Q6KCM7 469 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 FIGNL1Q6PIW4 674 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 GALNTL5Q7Z4T8 443 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 RP9Q8TA86 221 aaKnown RBP17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 PAQR8Q8TEZ7 354 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 DIO2Q92813 273 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 RAB8BQ92930 207 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 COL21A1Q96P44 957 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 LRRC37BQ96QE4 947 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 BTBD2Q9BX70 525 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 TIMMDC1Q9NPL8 285 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 COL6A6A6NMZ7 2263 aa17.44■□□□□ 0.38
CLPTM1-209ENST00000588855 G3V3Y1 287 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 CLIC1O00299 241 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 NME2P1O60361 137 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 UNC5CO95185 931 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 IL33O95760 270 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 OR12D1P0DN82 309 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 NME2P22392 152 aa17.43■□□□□ 0.38
CLPTM1-209ENST00000588855 SOWAHCQ53LP3 525 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms