RNA–Protein interactions for RNA: ENST00000588809.1

CCDC130-209, Transcript of coiled-coil domain containing 130, humanhuman

TSL 3

Gene CCDC130, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-209ENST00000588809 UPK1AO00322 258 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 NPHS1O60500 1241 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 TBX19O60806 448 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 IL12BP29460 328 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 ALDH3A1P30838 453 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 TIMP3P35625 211 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 KRT20P35900 424 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 MRPS22P82650 360 aaKnown RBP17.49■□□□□ 0.39
CCDC130-209ENST00000588809 TOMM20Q15388 145 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 SF3B4Q15427 424 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC130-209ENST00000588809 HSPB2Q16082 182 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 WIPI1Q5MNZ9 446 aaPredicted RBP17.49■□□□□ 0.39
CCDC130-209ENST00000588809 DCST1Q5T197 706 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 NSUN5P2Q63ZY6 315 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 TMEM107Q6UX40 140 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 LARP4Q71RC2 724 aaKnown RBP eCLIP17.49■□□□□ 0.39
CCDC130-209ENST00000588809 SLC44A2Q8IWA5 706 aaPredicted RBP17.49■□□□□ 0.39
CCDC130-209ENST00000588809 OR4N2Q8NGD1 307 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 ABTB1Q969K4 478 aaPredicted RBP17.49■□□□□ 0.39
CCDC130-209ENST00000588809 ELP4Q96EB1 424 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 WDYHV1Q96HA8 205 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 FAM111AQ96PZ2 611 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 SERHLQ9NQF3 203 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 SLC17A7Q9P2U7 560 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 MAPRE3Q9UPY8 281 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 TMED5Q9Y3A6 229 aa17.49■□□□□ 0.39
CCDC130-209ENST00000588809 KDM4EB2RXH2 506 aaPredicted RBP17.48■□□□□ 0.39
CCDC130-209ENST00000588809 LSM1O15116 133 aaKnown RBP17.48■□□□□ 0.39
CCDC130-209ENST00000588809 CHEK2O96017 543 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 CHRNGP07510 517 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 CPN1P15169 458 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 SDC1P18827 310 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 CAPN3P20807 821 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 GAS1P54826 345 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 TLE4Q04727 773 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 IFFO1Q0D2I5 559 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 ZNF155Q12901 538 aaPredicted RBP17.48■□□□□ 0.39
CCDC130-209ENST00000588809 UGT3A2Q3SY77 523 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 CYP27C1Q4G0S4 372 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 YRDCQ86U90 279 aaKnown RBP17.48■□□□□ 0.39
CCDC130-209ENST00000588809 PLCZ1Q86YW0 608 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 CLYBLQ8N0X4 340 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 NAXEQ8NCW5 288 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 MECRQ9BV79 373 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 TMEM109Q9BVC6 243 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 SLC24A3Q9HC58 644 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 DDX18Q9NVP1 670 aaKnown RBP17.48■□□□□ 0.39
CCDC130-209ENST00000588809 CAMK2AQ9UQM7 478 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 MRPS18CQ9Y3D5 142 aaKnown RBP17.48■□□□□ 0.39
CCDC130-209ENST00000588809 OR10H1Q9Y4A9 318 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 AKAP6Q13023 2319 aa17.48■□□□□ 0.39
CCDC130-209ENST00000588809 CD8B2A6NJW9 211 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 SRD5A2P31213 254 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 GFRA1P56159 465 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 KRTAP10-9P60411 292 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 PDE7AQ13946 482 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 RFTN2Q52LD8 501 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-209ENST00000588809 ARL13AQ5H913 290 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-209ENST00000588809 POMZP3Q6PJE2 187 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 MREGQ8N565 214 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 TNIP2Q8NFZ5 429 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 TCP10LQ8TDR4 215 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 HOXB13Q92826 284 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-209ENST00000588809 EFHD2Q96C19 240 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-209ENST00000588809 DTNBP1Q96EV8 351 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 LMF2Q9BU23 707 aaKnown RBP17.47■□□□□ 0.39
CCDC130-209ENST00000588809 ZNF629Q9UEG4 869 aaPredicted RBP17.47■□□□□ 0.39
CCDC130-209ENST00000588809 KCNN3Q9UGI6 736 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 FIS1Q9Y3D6 152 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 TRAF6Q9Y4K3 522 aa17.47■□□□□ 0.39
CCDC130-209ENST00000588809 MBD3L4A6NDZ8 208 aaPredicted RBP17.46■□□□□ 0.39
CCDC130-209ENST00000588809 MBD3L3A6NE82 208 aaPredicted RBP17.46■□□□□ 0.39
CCDC130-209ENST00000588809 MBD3L5A6NJ08 208 aaPredicted RBP17.46■□□□□ 0.39
CCDC130-209ENST00000588809 TMEM233B4DJY2 109 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 B4DXG7 233 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 PDPK1O15530 556 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 SPAG7O75391 227 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 SLU7O95391 586 aaKnown RBP17.46■□□□□ 0.39
CCDC130-209ENST00000588809 LINC00032P0C843 101 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 GRK2P25098 689 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 EVI2BP34910 448 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 GCKP35557 465 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 SERPINB5P36952 375 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 FRKP42685 505 aaPredicted RBP17.46■□□□□ 0.39
CCDC130-209ENST00000588809 DLX5P56178 289 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 RPL38P63173 70 aaKnown RBP17.46■□□□□ 0.39
CCDC130-209ENST00000588809 FBXL19-AS1Q494R0 122 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 RELL2Q8NC24 303 aaPredicted RBP17.46■□□□□ 0.39
CCDC130-209ENST00000588809 MBD3L2Q8NHZ7 208 aaPredicted RBP17.46■□□□□ 0.39
CCDC130-209ENST00000588809 ZPLD1Q8TCW7 415 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 TWIST2Q8WVJ9 160 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 REEP4Q9H6H4 257 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 CALHM2Q9HA72 323 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 EML4Q9HC35 981 aaKnown RBP17.46■□□□□ 0.39
CCDC130-209ENST00000588809 NTMQ9P121 344 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 FBXL2Q9UKC9 423 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 CBLCQ9ULV8 474 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 ABCG2Q9UNQ0 655 aa17.46■□□□□ 0.39
CCDC130-209ENST00000588809 ITPR3Q14573 2671 aa17.45■□□□□ 0.38
CCDC130-209ENST00000588809 TTC36A6NLP5 189 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms