RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 PAGE2Q7Z2X7 111 aa13.73□□□□□ -0.21
IFT20-216ENST00000588477 WFDC8Q8IUA0 241 aa13.73□□□□□ -0.21
IFT20-216ENST00000588477 CTAGE3PQ8IX95 158 aa13.73□□□□□ -0.21
IFT20-216ENST00000588477 GBP7Q8N8V2 638 aaPredicted RBP13.73□□□□□ -0.21
IFT20-216ENST00000588477 OR5M1Q8NGP8 315 aa13.73□□□□□ -0.21
IFT20-216ENST00000588477 AKAP1Q92667 903 aaKnown RBP eCLIP13.73□□□□□ -0.21
IFT20-216ENST00000588477 TRMT61AQ96FX7 289 aaKnown RBP13.73□□□□□ -0.21
IFT20-216ENST00000588477 LRRC1Q9BTT6 524 aa13.73□□□□□ -0.21
IFT20-216ENST00000588477 DSN1Q9H410 356 aa13.73□□□□□ -0.21
IFT20-216ENST00000588477 AHSPQ9NZD4 102 aa13.73□□□□□ -0.21
IFT20-216ENST00000588477 PPP4R1LQ9P1A2 415 aa13.73□□□□□ -0.21
IFT20-216ENST00000588477 TCRBV9S1A1TA0A576 114 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 FAM159BA6NKW6 160 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 PHF1O43189 567 aaPredicted RBP13.72□□□□□ -0.21
IFT20-216ENST00000588477 NME6O75414 186 aaPredicted RBP13.72□□□□□ -0.21
IFT20-216ENST00000588477 CLDN9O95484 217 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 MAPK12P53778 367 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 ALDH18A1P54886 795 aaKnown RBP13.72□□□□□ -0.21
IFT20-216ENST00000588477 CORO7P57737 925 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 OCRLQ01968 901 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 EFR3AQ14156 821 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 GUSBP1Q15486 140 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 CHRFAM7AQ494W8 412 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 GRTP1Q5TC63 336 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 STAC2Q6ZMT1 411 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 LARP4Q71RC2 724 aaKnown RBP eCLIP13.72□□□□□ -0.21
IFT20-216ENST00000588477 TRPC4APQ8TEL6 797 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 KCTD4Q8WVF5 259 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 ATP6V1E2Q96A05 226 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 KLHL29Q96CT2 875 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 TMEM204Q9BSN7 226 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 PLSCR4Q9NRQ2 329 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 ADAM29Q9UKF5 820 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 ZNF175Q9Y473 711 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 FREM1Q5H8C1 2179 aa13.72□□□□□ -0.21
IFT20-216ENST00000588477 OVOL3O00110 214 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 SCO2O43819 266 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 GUCY1B2O75343 617 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 AQP8O94778 261 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 SIX3O95343 332 aaPredicted RBP13.71□□□□□ -0.21
IFT20-216ENST00000588477 F12P00748 615 aaPredicted RBP13.71□□□□□ -0.21
IFT20-216ENST00000588477 CT45A8P0DMV1 189 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 CT45A9P0DMV2 189 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 ACVR1BP36896 505 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 CDKN1AP38936 164 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 ALDH9A1P49189 494 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 PNLIPRP2P54317 469 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 CLDN20P56880 219 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 IRF9Q00978 393 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 ETFDHQ16134 617 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 SGCBQ16585 318 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 CT45A2Q5DJT8 189 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 TTC19Q6DKK2 380 aaPredicted RBP13.71□□□□□ -0.21
IFT20-216ENST00000588477 PPP4R4Q6NUP7 873 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 C3orf62Q6ZUJ4 267 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 MILR1Q7Z6M3 343 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 METTL4Q8N3J2 472 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 FADS6Q8N9I5 356 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 OR2M3Q8NG83 312 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 RHEBL1Q8TAI7 183 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 RAB3IL1Q8TBN0 382 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 RNF138Q8WVD3 245 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 EFHD2Q96C19 240 aaPredicted RBP13.71□□□□□ -0.21
IFT20-216ENST00000588477 TM4SF18Q96CE8 201 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 CNRIP1Q96F85 164 aaPredicted RBP13.71□□□□□ -0.21
IFT20-216ENST00000588477 ZBED6CLQ96FA7 236 aaPredicted RBP13.71□□□□□ -0.21
IFT20-216ENST00000588477 BTBD9Q96Q07 612 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 STMN4Q9H169 189 aaPredicted RBP13.71□□□□□ -0.21
IFT20-216ENST00000588477 NOL11Q9H8H0 719 aaKnown RBP13.71□□□□□ -0.21
IFT20-216ENST00000588477 SAYSD1Q9NPB0 183 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 MED11Q9P086 117 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 PSME2Q9UL46 239 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 ACOT9Q9Y305 439 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 SNX24Q9Y343 169 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 ZNF780BQ9Y6R6 833 aa13.71□□□□□ -0.21
IFT20-216ENST00000588477 OR2M5A3KFT3 312 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 OR7A17O14581 309 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 ALDOAP04075 364 aaKnown RBP13.7□□□□□ -0.22
IFT20-216ENST00000588477 CRABP2P29373 138 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 RPS3AP61247 264 aaKnown RBP13.7□□□□□ -0.22
IFT20-216ENST00000588477 FRG2Q64ET8 278 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 ALKBH2Q6NS38 261 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 NPSR1Q6W5P4 371 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 COMMD6Q7Z4G1 85 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 CENPLQ8N0S6 344 aaPredicted RBP13.7□□□□□ -0.22
IFT20-216ENST00000588477 PPM1NQ8N819 430 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 OR4N2Q8NGD1 307 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 OR52B6Q8NGF0 335 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 LILRB1Q8NHL6 650 aaPredicted RBP13.7□□□□□ -0.22
IFT20-216ENST00000588477 GFM2Q969S9 779 aaKnown RBP13.7□□□□□ -0.22
IFT20-216ENST00000588477 GTPBP3Q969Y2 492 aaKnown RBP13.7□□□□□ -0.22
IFT20-216ENST00000588477 ZNF681Q96N22 645 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 FRG2BQ96QU4 278 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 PRRG4Q9BZD6 226 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 ACTR6Q9GZN1 396 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 SLCO5A1Q9H2Y9 848 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
IFT20-216ENST00000588477 CLEC4AQ9UMR7 237 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 EMC9Q9Y3B6 208 aa13.7□□□□□ -0.22
IFT20-216ENST00000588477 A8MV72 311 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms