RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 NUDT22Q9BRQ3 303 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 TAPBPLQ9BX59 468 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 NLNQ9BYT8 704 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 SLC6A16Q9GZN6 736 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 A4GALTQ9NPC4 353 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 MIEF1Q9NQG6 463 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 KLK13Q9UKR3 277 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 CACNA1AO00555 2505 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 SPTBN2O15020 2390 aa13.72□□□□□ -0.21
CCDC43-203ENST00000588210 COL27A1Q8IZC6 1860 aaPredicted RBP13.72□□□□□ -0.21
CCDC43-203ENST00000588210 CCRL2O00421 344 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 SNX4O95219 450 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 GASTP01350 101 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 ADRA2AP08913 450 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 HSMCR30P0CW71 290 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 FUT4P22083 530 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 CCKBRP32239 447 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 SOX6P35712 828 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 CAPZBP47756 277 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 PDX1P52945 283 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 CYP4F2P78329 520 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 MEF2AQ02078 507 aaPredicted RBP13.71□□□□□ -0.21
CCDC43-203ENST00000588210 CFHR1Q03591 330 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 ZFP36L1Q07352 338 aaKnown RBP13.71□□□□□ -0.21
CCDC43-203ENST00000588210 KRR1Q13601 381 aaKnown RBP13.71□□□□□ -0.21
CCDC43-203ENST00000588210 TSTQ16762 297 aaKnown RBP13.71□□□□□ -0.21
CCDC43-203ENST00000588210 PLAG1Q6DJT9 500 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 PTCHD4Q6ZW05 846 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 TMPRSS9Q7Z410 1059 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 PLXDC1Q8IUK5 500 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 OR52E1Q8NGJ3 308 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 EFHD2Q96C19 240 aaPredicted RBP13.71□□□□□ -0.21
CCDC43-203ENST00000588210 OR5M11Q96RB7 305 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 MGLLQ99685 303 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 RAB33BQ9H082 229 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 CXorf36Q9H7Y0 433 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 SPATA7Q9P0W8 599 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 NDOR1Q9UHB4 597 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 MSRB2Q9Y3D2 182 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 ENTPD2Q9Y5L3 495 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 PNMA8CA0A1B0GUJ8 204 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 KIAA0513O60268 411 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 TBX19O60806 448 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 KCNK2O95069 426 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 DLGAP3O95886 979 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 TYRP1P17643 537 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 SPINK2P20155 84 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 CSF2RBP32927 897 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 SEPHS1P49903 392 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 TPTEP56180 551 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 PRAMEF13Q5VWM6 474 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 SAXO2Q658L1 398 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 LCTLQ6UWM7 567 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 ZNF574Q6ZN55 896 aaPredicted RBP13.71□□□□□ -0.21
CCDC43-203ENST00000588210 SLITRK4Q8IW52 837 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 DCUN1D3Q8IWE4 304 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 CYP4Z2PQ8N1L4 340 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 SCAIQ8N9R8 606 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 LMNTD1Q8N9Z9 388 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 CHAC2Q8WUX2 184 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 LCN9Q8WX39 176 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 NEURL3Q96EH8 262 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 SLC25A19Q9HC21 320 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 EPHA6Q9UF33 1036 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 MKLN1Q9UL63 735 aa13.71□□□□□ -0.21
CCDC43-203ENST00000588210 FFAR1O14842 300 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 HOXB3P14651 431 aaPredicted RBP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 GTF2E2P29084 291 aaKnown RBP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 LIM2P55344 173 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 SNRPGP62308 76 aaKnown RBP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 RHAGQ02094 409 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 TRA2AQ13595 282 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 MED22Q15528 200 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 DUSP7Q16829 419 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 TMEM201Q5SNT2 666 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 TMIGD1Q6UXZ0 262 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 CEACAM20Q6UY09 585 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 CCDC190Q86UF4 302 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 OOSP2Q86WS3 158 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 NLGN4XQ8N0W4 816 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 NATD1Q8N6N6 113 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 ZNF740Q8NDX6 193 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 OR4E2Q8NGC2 313 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 WDR36Q8NI36 951 aaKnown RBP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 JPH3Q8WXH2 748 aaPredicted RBP13.7□□□□□ -0.22
CCDC43-203ENST00000588210 RSC1A1Q92681 617 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 DHRS1Q96LJ7 313 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 STRADBQ9C0K7 418 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 RACGAP1Q9H0H5 632 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 SRMSQ9H3Y6 488 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 QPCTLQ9NXS2 382 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 RHCGQ9UBD6 479 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 PCDHGB6Q9Y5F9 930 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 A0A075B6Q4 140 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 TRBV4-1A0A0J9YWV2 114 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 IGHV5-10-1A0A0J9YXX1 117 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 HTR3EA5X5Y0 456 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 OR5K3A6NET4 321 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 LOC110117498-PIK3R3F6TDL0 507 aa13.7□□□□□ -0.22
CCDC43-203ENST00000588210 COQ9O75208 318 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms