RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 SUSD5O60279 629 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 SLC19A2O60779 497 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 TRIM3O75382 744 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 REM1O75628 298 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 IL33O95760 270 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 AGR2O95994 175 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 IL6P05231 212 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 NGFRP08138 427 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 ALOX5P09917 674 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 LAMP1P11279 417 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 S100A3P33764 101 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 GCKP35557 465 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 PIGAP37287 484 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 CA7P43166 264 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 DNASE1L1P49184 302 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 CDK9P50750 372 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 ANXA11P50995 505 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 FBXW4P57775 412 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 TP53BP2Q13625 1128 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 UBAP2LQ14157 1087 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 CMPK2Q5EBM0 449 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 MFSD12Q6NUT3 480 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 CDC73Q6P1J9 531 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 EPGNQ6UW88 154 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 NPSR1Q6W5P4 371 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 TMEM251Q8N6I4 163 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 TRIML2Q8N7C3 387 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 TMBIM1Q969X1 311 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 RELTQ969Z4 430 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 FAM120BQ96EK7 910 aaKnown RBP12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 GIMAP5Q96F15 307 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 MARK4Q96L34 752 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 RILPQ96NA2 401 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 G6PC3Q9BUM1 346 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 PIGUQ9H490 435 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 CCDC134Q9H6E4 229 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 SDHAF3Q9NRP4 125 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 SIRT3Q9NTG7 399 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 TUBA8Q9NY65 449 aaPredicted RBP12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 KLRF1Q9NZS2 232 aa12.67□□□□□ -0.38
PRKCSH-202ENST00000585540 SVILO95425 2214 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 BCKDKO14874 412 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 SNPHO15079 494 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 UBDO15205 165 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 CFLARO15519 480 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 UGT2B11O75310 529 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 AGFG2O95081 481 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 C6orf47O95873 294 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 ABOP16442 354 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 CCT3P49368 545 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 IDH3AP50213 366 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 GYS2P54840 703 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 AQP5P55064 265 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 CORO7P57737 925 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 STX1BP61266 288 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 SLC10A1Q14973 349 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 NNATQ16517 81 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 SPDYE7PQ495Y7 208 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 EXOSC6Q5RKV6 272 aaKnown RBP12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 PRAMEF20Q5VT98 475 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 CGB2Q6NT52 195 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 SZRD1Q7Z422 152 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 SPPL2CQ8IUH8 684 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 MISPQ8IVT2 679 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 PRR22Q8IZ63 422 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 RFWD2Q8NHY2 731 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 PRR7Q8TB68 274 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 SSC4DQ8WTU2 575 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 SARAFQ96BY9 339 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 ACTRT3Q9BYD9 372 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 NPHS2Q9NP85 383 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 TCF7L2Q9NQB0 619 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 SDR39U1Q9NRG7 319 aaPredicted RBP12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 FGFR1OP2Q9NVK5 253 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 BTNL2Q9UIR0 455 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 FAF1Q9UNN5 650 aaPredicted RBP12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 WIF1Q9Y5W5 379 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 GPR45Q9Y5Y3 372 aa12.66□□□□□ -0.38
PRKCSH-202ENST00000585540 PINLYPA6NC86 204 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 AQP7O14520 342 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 HMGN2P05204 90 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 PGRP06401 933 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 GUSBP08236 651 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 HOXD4P09016 255 aaPredicted RBP12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 ENDOUP21128 410 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 PTGS2P35354 604 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 ST13P50502 369 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 ATP4BP51164 291 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 NME5P56597 212 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 GANABQ14697 944 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 SF3B4Q15427 424 aaKnown RBP eCLIP12.65□□□□□ -0.381e-7■■■■■ 27.7
PRKCSH-202ENST00000585540 EIF2S3LQ2VIR3 472 aaKnown RBP12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 TIGD3Q6B0B8 471 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 OR4F3Q6IEY1 312 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 RPTNQ6XPR3 784 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 COX18Q8N8Q8 333 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 SIMC1Q8NDZ2 872 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 OR1J4Q8NGS1 313 aa12.65□□□□□ -0.38
PRKCSH-202ENST00000585540 GOT1L1Q8NHS2 421 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms