RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 NME6O75414 186 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-215ENST00000584944 PPM1BO75688 479 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 FAM107AO95990 144 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 SP1P08047 785 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 FBXO45P0C2W1 286 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 MATN1P21941 496 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 PPIBP23284 216 aaKnown RBP12.78□□□□□ -0.36
TRAF4-215ENST00000584944 CRATP43155 626 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 KCNJ2P63252 427 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 PHC1P78364 1004 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 POU6F2P78424 691 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-215ENST00000584944 DUSP8Q13202 625 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 CYLC2Q14093 348 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-215ENST00000584944 SLC2A7Q6PXP3 512 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 FAM180AQ6UWF9 173 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 ZNF441Q8N8Z8 693 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 GOLM1Q8NBJ4 401 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 PCYOX1LQ8NBM8 494 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 CCDC197Q8NCU1 140 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 PSD4Q8NDX1 1056 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 GOT1L1Q8NHS2 421 aaPredicted RBP12.78□□□□□ -0.36
TRAF4-215ENST00000584944 TSPEARQ8WU66 669 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 DIO2Q92813 273 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 MIB2Q96AX9 1013 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 LRRC37BQ96QE4 947 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 ADOQ96SZ5 270 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 LMF2Q9BU23 707 aaKnown RBP12.78□□□□□ -0.36
TRAF4-215ENST00000584944 NMUR2Q9GZQ4 415 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 KLRF1Q9NZS2 232 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 CNIH4Q9P003 139 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 NTMQ9P121 344 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 ARMCX1Q9P291 453 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 CORO2BQ9UQ03 480 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 MED13Q9UHV7 2174 aa12.78□□□□□ -0.36
TRAF4-215ENST00000584944 A0A096LPI6 279 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 BBIP1A8MTZ0 92 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 EVPLLA8MZ36 301 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 TO15178 435 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 RASAL1O95294 804 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 CT45A8P0DMV1 189 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 CT45A9P0DMV2 189 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 MASP1P48740 699 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 CD97P48960 835 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 FBXW4P57775 412 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 RPS26P62854 115 aaKnown RBP12.77□□□□□ -0.37
TRAF4-215ENST00000584944 TXNL4AP83876 142 aaKnown RBP12.77□□□□□ -0.37
TRAF4-215ENST00000584944 PLGLB1Q02325 96 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 KLF10Q13118 480 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 NFYCQ13952 458 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 CT45A2Q5DJT8 189 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 ZNF468Q5VIY5 522 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-215ENST00000584944 CDC73Q6P1J9 531 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 Q6ZS92 163 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 NUP54Q7Z3B4 507 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 PACS2Q86VP3 889 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 SNX32Q86XE0 403 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 FUNDC1Q8IVP5 155 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 CLEC4FQ8N1N0 589 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 RBMXL3Q8N7X1 1067 aaKnown RBP12.77□□□□□ -0.37
TRAF4-215ENST00000584944 SLC16A11Q8NCK7 471 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 PNPT1Q8TCS8 783 aaKnown RBP12.77□□□□□ -0.37
TRAF4-215ENST00000584944 XAGE5Q8WWM1 108 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 PIK3R3Q92569 461 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 EFHD2Q96C19 240 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-215ENST00000584944 CMTM5Q96DZ9 223 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 NEURL3Q96EH8 262 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 C16orf58Q96GQ5 468 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 JSRP1Q96MG2 331 aaPredicted RBP12.77□□□□□ -0.37
TRAF4-215ENST00000584944 SIGLEC12Q96PQ1 595 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 STACQ99469 402 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 BTBD2Q9BX70 525 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 IL1RL2Q9HB29 575 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 DUSP22Q9NRW4 184 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 AGPAT4Q9NRZ5 378 aa12.77□□□□□ -0.37
TRAF4-215ENST00000584944 SPTAN1Q13813 2472 aaKnown RBP12.77□□□□□ -0.37
TRAF4-215ENST00000584944 LOC100653049A0A140TA62 436 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 OR6C70A6NIJ9 312 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 ACOT7O00154 380 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 NME2P1O60361 137 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 SHOX2O60902 331 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-215ENST00000584944 SCN2BO60939 215 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 KRT34O76011 436 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 PSMG1O95456 288 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 AK1P00568 194 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 CRYABP02511 175 aaKnown RBP12.76□□□□□ -0.37
TRAF4-215ENST00000584944 ZCCHC18P0CG32 403 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 CAPN3P20807 821 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 NME2P22392 152 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 PIGAP37287 484 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 CDKN2CP42773 168 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 PNLIPRP2P54317 469 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 CASP9P55211 416 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 PSG6Q00889 435 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 GAB1Q13480 694 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 GNA13Q14344 377 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 INAQ16352 499 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 NTRK2Q16620 822 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 DUSP5Q16690 384 aa12.76□□□□□ -0.37
TRAF4-215ENST00000584944 ZNF791Q3KP31 576 aaPredicted RBP12.76□□□□□ -0.37
TRAF4-215ENST00000584944 PLEKHN1Q494U1 663 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms