RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PLCXD2Q0VAA5 305 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 ARHGAP11BQ3KRB8 267 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 SPATS1Q496A3 300 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 GPAT3Q53EU6 434 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 AGAP7PQ5VUJ5 663 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 FCRLBQ6BAA4 426 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 ERICH5Q6P6B1 374 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 IFNEQ86WN2 208 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 ARMC10Q8N2F6 343 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 TNIP2Q8NFZ5 429 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 PSMF1Q92530 271 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 AGAP4Q96P64 663 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 G6PC3Q9BUM1 346 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 ALG2Q9H553 416 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 PIF1Q9H611 641 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 TMEM38AQ9H6F2 299 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 A4GALTQ9NPC4 353 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 GPR83Q9NYM4 423 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 CALML5Q9NZT1 146 aa16.92■□□□□ 0.3
RFFL-211ENST00000584541 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.92■□□□□ 0.3
RFFL-211ENST00000584541 GXYLT2A0PJZ3 443 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 FAM220BPB1ANY3 271 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 RRP9O43818 475 aaKnown RBP16.91■□□□□ 0.3
RFFL-211ENST00000584541 SLC28A2O43868 658 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 DNAJC8O75937 253 aaPredicted RBP16.91■□□□□ 0.3
RFFL-211ENST00000584541 ATP6V1C1P21283 382 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 IL12BP29460 328 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 NCALDP61601 193 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 ZNF630Q2M218 657 aaPredicted RBP16.91■□□□□ 0.3
RFFL-211ENST00000584541 ACER2Q5QJU3 275 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 DCST2Q5T1A1 773 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 B3GNTL1Q67FW5 361 aaPredicted RBP16.91■□□□□ 0.3
RFFL-211ENST00000584541 HEPHL1Q6MZM0 1159 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 BORAQ6PGQ7 559 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 OPN5Q6U736 354 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 C16orf47Q6ZP98 133 aaPredicted RBP16.91■□□□□ 0.3
RFFL-211ENST00000584541 NET1Q7Z628 596 aaPredicted RBP16.91■□□□□ 0.3
RFFL-211ENST00000584541 CALHM3Q86XJ0 350 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 SLC30A8Q8IWU4 369 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 TMEM156Q8N614 296 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 METTL25Q8N6Q8 603 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 BCORP1Q8N888 145 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 C11orf65Q8NCR3 313 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 CHDHQ8NE62 594 aaPredicted RBP16.91■□□□□ 0.3
RFFL-211ENST00000584541 OR2T12Q8NG77 320 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 OR4N2Q8NGD1 307 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 ASB15Q8WXK1 588 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 TMBIM1Q969X1 311 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 MCUR1Q96AQ8 359 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 OMA1Q96E52 524 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 REXO5Q96IC2 774 aaKnown RBP16.91■□□□□ 0.3
RFFL-211ENST00000584541 RASL10BQ96S79 203 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 KCTD14Q9BQ13 255 aaPredicted RBP16.91■□□□□ 0.3
RFFL-211ENST00000584541 THTPAQ9BU02 230 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 STMN3Q9NZ72 180 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 NPFFR2Q9Y5X5 522 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 KCNE3Q9Y6H6 103 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 CEP295Q9C0D2 2601 aa16.91■□□□□ 0.3
RFFL-211ENST00000584541 REM1O75628 298 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 DNAJB5O75953 348 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 KCNK2O95069 426 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 ALPPP05187 535 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 BCHEP06276 602 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 NUDT7P0C024 238 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 ARAFP10398 606 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 NAGAP17050 411 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 ABCD3P28288 659 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 RFX3P48380 749 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 CRISP3P54108 245 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 FIGNL1Q6PIW4 674 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 ISLR2Q6UXK2 745 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 DND1Q8IYX4 353 aaKnown RBP16.9■□□□□ 0.3
RFFL-211ENST00000584541 PRR22Q8IZ63 422 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 C10orf111Q8N326 155 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 SNRNP27Q8WVK2 155 aaKnown RBP16.9■□□□□ 0.3
RFFL-211ENST00000584541 ZNF583Q96ND8 569 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 TRNT1Q96Q11 434 aaKnown RBP16.9■□□□□ 0.3
RFFL-211ENST00000584541 LRMDAQ9H2I8 198 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 ANGPT4Q9Y264 503 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 ZNF451Q9Y4E5 1061 aa16.9■□□□□ 0.3
RFFL-211ENST00000584541 ACACBO00763 2458 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 ELOVL7A1L3X0 281 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 CDK2AP1O14519 115 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 HS6ST1O60243 411 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 ABCB7O75027 752 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 STX11O75558 287 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 NADKO95544 446 aaPredicted RBP16.89■□□□□ 0.29
RFFL-211ENST00000584541 IL33O95760 270 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 TFPTP0C1Z6 253 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 SOX11P35716 441 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 CASRP41180 1078 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 GSK3BP49841 420 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 GZMMP51124 257 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 CDK6Q00534 326 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 RAPSNQ13702 412 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 SCARB2Q14108 478 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 SYPL1Q16563 259 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 VMACQ2NL98 169 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 CCNJQ5T5M9 372 aa16.89■□□□□ 0.29
RFFL-211ENST00000584541 REEP3Q6NUK4 255 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms