RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 TMEM184AQ6ZMB5 413 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 LPCAT2Q7L5N7 544 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 CENPLQ8N0S6 344 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 GCNT2Q8N0V5 402 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 FGFRL1Q8N441 504 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 NFAM1Q8NET5 270 aaPredicted RBP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 TBCKQ8TEA7 893 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 CRYGNQ8WXF5 182 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 MCHR2Q969V1 340 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 ELMO2Q96JJ3 720 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 C9orf85Q96MD7 179 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 VSTM2LQ96N03 204 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 SOSTQ9BQB4 213 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 FEM1AQ9BSK4 669 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 THUMPD2Q9BTF0 503 aaKnown RBP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 TBCDQ9BTW9 1192 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF416Q9BWM5 594 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 ZBP1Q9H171 429 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 WDR76Q9H967 626 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 GNB4Q9HAV0 340 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 FAM114A2Q9NRY5 505 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 SLC35D1Q9NTN3 355 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 PAK5Q9P286 719 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 RNF24Q9Y225 148 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 RNF6Q9Y252 685 aa2.95□□□□□ -1.94
SMCHD1-209ENST00000583441 A0A0U1RQV5 110 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 H3BMH7 237 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 K7EPI3 171 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 ANGPT2O15123 496 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 MAPK13O15264 365 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 DIRAS3O95661 229 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 GUCA1CO95843 209 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 HPP00738 406 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 IFNB1P01574 187 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 KRT8P05787 483 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 MELTFP08582 738 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 PVRP15151 417 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 CYP2F1P24903 491 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 CALRP27797 417 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 SHC1P29353 583 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 KIF5BP33176 963 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 ADRA1AP35348 466 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 HTR5AP47898 357 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 RAG2P55895 527 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 LMO4P61968 165 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 CYLC2Q14093 348 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 ZIC1Q15915 447 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 CDKN3Q16667 212 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 TPD52L1Q16890 204 aaPredicted RBP2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 MICAQ29983 383 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 NHLRC3Q5JS37 347 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 FAM219BQ5XKK7 198 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 CENPUQ71F23 418 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 TIPARPQ7Z3E1 657 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF573Q86YE8 665 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 CBWD2Q8IUF1 395 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 EFCAB13Q8IY85 973 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 OR4F17Q8NGA8 305 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 OR5AU1Q8NGC0 362 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 FNDC8Q8TC99 324 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 OR4F4Q96R69 305 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 ATOH8Q96SQ7 321 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 SLC30A2Q9BRI3 323 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 RIBC2Q9H4K1 309 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 LIN28AQ9H9Z2 209 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 FARSBQ9NSD9 589 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 C1orf123Q9NWV4 160 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 IMPAD1Q9NX62 359 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 ZNF581Q9P0T4 197 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 SH3BGRL2Q9UJC5 107 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 NTNG1Q9Y2I2 539 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 EXOSC1Q9Y3B2 195 aaKnown RBP2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 ATP6V0A2Q9Y487 856 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 AP4B1Q9Y6B7 739 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 CCDC7Q96M83 1385 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 CUX2O14529 1486 aa2.94□□□□□ -1.94
SMCHD1-209ENST00000583441 CARMIL1Q5VZK9 1371 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 A0A1B0GUL7 405 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 A0A1B0GWJ7 208 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 LRRC30A6NM36 301 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 E9PAM4 449 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 H0YL77 283 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 TM9SF1O15321 606 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 SMPD2O60906 423 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 SDC3O75056 442 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 PEX11AO75192 247 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 KBTBD11O94819 623 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 PRAMEF12O95522 483 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 IGHV3-9P01782 118 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 GSTT2P0CG29 244 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 GSTT2BP0CG30 244 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 BCKDHAP12694 445 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 NCF1P14598 390 aaPredicted RBP2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 TSPAN8P19075 237 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 PAICSP22234 425 aaKnown RBP2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 PSMA2P25787 234 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 PTGFRP43088 359 aa2.93□□□□□ -1.94
SMCHD1-209ENST00000583441 CRMP1Q14194 572 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms