RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 AP4S1Q9Y587 144 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 HEY1Q9Y5J3 304 aa3.58□□□□□ -1.84
SMCHD1-208ENST00000583344 TMEM221A6NGB7 291 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 LRRC72A6NJI9 287 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 TRPC5OSA6NMA1 111 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 MEI4A8MW99 385 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 M0QYV0 167 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 TXNDC9O14530 226 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 AIM2O14862 343 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 PAPSS1O43252 624 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 CACNG3O60359 315 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 PFDN1O60925 122 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 KERAO60938 352 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC25A12O75746 678 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 DDHD2O94830 711 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 TPOP07202 933 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 STAG3L1P0CL83 205 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ETS2P15036 469 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 TCF7P36402 384 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ACADSBP45954 432 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 CCR10P46092 362 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ATP4BP51164 291 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 TKTL1P51854 596 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 NDST1P52848 882 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 THOP1P52888 689 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 AIF1P55008 147 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 GBE1Q04446 702 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ZNF33AQ06730 810 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ILF2Q12905 390 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 RLFQ13129 1914 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ART3Q13508 389 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 OLIG2Q13516 323 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 FLOT2Q14254 428 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 IL11RAQ14626 422 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 PDK1Q15118 436 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 MAPRE2Q15555 327 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ZBTB6Q15916 424 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 DUOXA1Q1HG43 343 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ZNF829Q3KNS6 432 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 NHSL2Q5HYW2 709 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 TCHHL1Q5QJ38 904 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 SEL1L3Q68CR1 1132 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 NCBP2-AS2Q69YL0 99 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 JADE1Q6IE81 842 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 SNRNP48Q6IEG0 339 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 RAB12Q6IQ22 244 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 PMF1Q6P1K2 205 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 SCYL2Q6P3W7 929 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 METTL7BQ6UX53 244 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 GLDNQ6ZMI3 551 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 LINC00299Q6ZSB3 139 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 P2RY8Q86VZ1 359 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ZNF619Q8N2I2 560 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 TRIML2Q8N7C3 387 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 RNF149Q8NC42 400 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ZNF420Q8TAQ5 688 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 FNDC8Q8TC99 324 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 LPGAT1Q92604 370 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 PTP4A1Q93096 173 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 PTERQ96BW5 349 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ASB9Q96DX5 294 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 HPDLQ96IR7 371 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 CSPG4P5Q96PW8 444 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 TSPAN18Q96SJ8 248 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 CYP2S1Q96SQ9 504 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 VAT1Q99536 393 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 GPR22Q99680 433 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 KIFC1Q9BW19 673 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 TEX13BQ9BXU2 312 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ANKRD60Q9BZ19 345 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ABCG4Q9H172 646 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 COQ10BQ9H8M1 238 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 WDR41Q9HAD4 459 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 PNPLA3Q9NST1 481 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 PRMT7Q9NVM4 692 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 DUS2Q9NX74 493 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 BFARQ9NZS9 450 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 KLHL8Q9P2G9 620 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 ZDHHC2Q9UIJ5 367 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 TSPAN16Q9UKR8 245 aa3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 RUVBL2Q9Y230 463 aaKnown RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 MTF2Q9Y483 593 aaPredicted RBP3.57□□□□□ -1.84
SMCHD1-208ENST00000583344 PARP14Q460N5 1801 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 A0A087WXM4 84 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 SDHDO14521 159 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 KLHL41O60662 606 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 RECQL5O94762 991 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 PIGNO95427 931 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 NADKO95544 446 aaPredicted RBP3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 C22orf31O95567 290 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 AP2A1O95782 977 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 SLC4A1P02730 911 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 FGF4P08620 206 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 HSPA8P11142 646 aaKnown RBP3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 UMPSP11172 480 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 LIFP15018 202 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 CYP2B6P20813 491 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 HMOX2P30519 316 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 MC5RP33032 325 aa3.56□□□□□ -1.84
SMCHD1-208ENST00000583344 MATKP42679 507 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms