RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 SLC25A36Q96CQ1 311 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 C9orf85Q96MD7 179 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 CCT8L2Q96SF2 557 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 WRAP53Q9BUR4 548 aaKnown RBP4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 KLRF1Q9NZS2 232 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 ACTR3BQ9P1U1 418 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 NTNG1Q9Y2I2 539 aa4.25□□□□□ -1.73
SMARCE1-219ENST00000583294 A0A1W2PQ72 361 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 H3BTX0 84 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 PDXKO00764 312 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 ALOX15BO15296 676 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 LCMT2O60294 686 aaKnown RBP4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 SRSF10O75494 262 aaKnown RBP4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 AKR7A3O95154 331 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 NDUFA7O95182 113 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 SLC35E2P0CK97 266 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 LAMP1P11279 417 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 PGAM2P15259 253 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 STK19P49842 368 aaPredicted RBP4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 METAP1P53582 386 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 MTTPP55157 894 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 IL9RQ01113 521 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 PAX2Q02962 417 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 ADPRMQ3LIE5 342 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 MARC1Q5VT66 337 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 SLX4IPQ5VYV7 408 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 LEG1Q6P5S2 330 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 UNC5DQ6UXZ4 953 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 LPCAT2Q7L5N7 544 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 ERASQ7Z444 233 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 SYVN1Q86TM6 617 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 ADCK1Q86TW2 530 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 ERICH1Q86X53 443 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 CD177Q8N6Q3 437 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 BCORP1Q8N888 145 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 KLHL30-AS1Q8NEE0 82 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 ANKRD20A12PQ8NF67 263 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 SELENOMQ8WWX9 145 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 PPP1R16AQ96I34 528 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 RPAP3Q9H6T3 665 aaPredicted RBP4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 TRPV5Q9NQA5 729 aa4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 FAM120CQ9NX05 1096 aaKnown RBP4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 BARX2Q9UMQ3 279 aaPredicted RBP4.24□□□□□ -1.73
SMARCE1-219ENST00000583294 TP53BP1Q12888 1972 aaPredicted RBP4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 FAM230AA0A1W2PPH8 454 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 ANKRD30BLA7E2S9 258 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 G3V3Y1 287 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 CASKO14936 926 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 TOM1L1O75674 476 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 IGFBP1P08833 259 aaPredicted RBP4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 PAICSP22234 425 aaKnown RBP4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 PPIAP62937 165 aaKnown RBP4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 EXOSC2Q13868 293 aaKnown RBP4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 UBE2V2Q15819 145 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 BTNL3Q6UXE8 466 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 GCNT7Q6ZNI0 430 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 VPS36Q86VN1 386 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 CERS5Q8N5B7 392 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 LINC00612Q8N6U2 182 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 GTSF1Q8WW33 167 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 VAT1LQ9HCJ6 419 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 C1orf123Q9NWV4 160 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 SLC2A6Q9UGQ3 507 aa4.23□□□□□ -1.73
SMARCE1-219ENST00000583294 TRBV7-9A0A0J9YWB2 115 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 RNF222A6NCQ9 220 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 FBLL1A6NHQ2 334 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 A8MX80 341 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 SCGB2A1O75556 95 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 GJB5O95377 273 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 APBB3O95704 486 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 SDC1P18827 310 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 ACVR1BP36896 505 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 OR1D4P47884 311 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 FNTAP49354 379 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 RPS6P62753 249 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 IL18R1Q13478 541 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 MISPQ8IVT2 679 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 Q8N9G6 341 aaPredicted RBP4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 NFAM1Q8NET5 270 aaPredicted RBP4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 ZPLD1Q8TCW7 415 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 GIPC3Q8TF64 312 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 ADIPOR1Q96A54 375 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 ELMO2Q96JJ3 720 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 RWDD1Q9H446 243 aaPredicted RBP4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 MEPEQ9NQ76 525 aaPredicted RBP4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 SENP1Q9P0U3 644 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 MGAT4BQ9UQ53 548 aa4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 EXOSC1Q9Y3B2 195 aaKnown RBP4.22□□□□□ -1.73
SMARCE1-219ENST00000583294 ATP8B3O60423 1300 aa4.21□□□□□ -1.73
SMARCE1-219ENST00000583294 A0A0U1RQV5 110 aa4.21□□□□□ -1.74
SMARCE1-219ENST00000583294 TSC22D2O75157 780 aa4.21□□□□□ -1.74
SMARCE1-219ENST00000583294 VPS26AO75436 327 aa4.21□□□□□ -1.74
SMARCE1-219ENST00000583294 B3GALNT1O75752 331 aa4.21□□□□□ -1.74
SMARCE1-219ENST00000583294 SLC2A10O95528 541 aa4.21□□□□□ -1.74
SMARCE1-219ENST00000583294 CCND2P30279 289 aa4.21□□□□□ -1.74
SMARCE1-219ENST00000583294 IL2RGP31785 369 aa4.21□□□□□ -1.74
SMARCE1-219ENST00000583294 CXCL6P80162 114 aa4.21□□□□□ -1.74
SMARCE1-219ENST00000583294 HSF2Q03933 536 aa4.21□□□□□ -1.74
SMARCE1-219ENST00000583294 PUDPQ08623 228 aa4.21□□□□□ -1.74
SMARCE1-219ENST00000583294 TFDP1Q14186 410 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms