RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 WIF1Q9Y5W5 379 aa9.6□□□□□ -0.87
RFFL-209ENST00000581265 JMJD1CQ15652 2540 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 A0A1W2PNV4 684 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 B4DXG7 233 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 TRIM49D1C9J1S8 452 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 ULK1O75385 1050 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 ESRRBO95718 433 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 IL3P08700 152 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 CTAGE8P0CG41 777 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 CHN1P15882 459 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 GRK2P25098 689 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 DPP4P27487 766 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 MPIP34949 423 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 KRT20P35900 424 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 CORO7P57737 925 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 B3GALT5-AS1P59052 145 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 RAE1P78406 368 aaKnown RBP9.59□□□□□ -0.87
RFFL-209ENST00000581265 NKX6-1P78426 367 aaPredicted RBP9.59□□□□□ -0.87
RFFL-209ENST00000581265 MRPS22P82650 360 aaKnown RBP9.59□□□□□ -0.87
RFFL-209ENST00000581265 CSTF3Q12996 717 aaKnown RBP9.59□□□□□ -0.87
RFFL-209ENST00000581265 RASA2Q15283 850 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 POU4F3Q15319 338 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 OR5M10Q6IEU7 315 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 OR2A2Q6IF42 318 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 GALNT18Q6P9A2 607 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 LARP4Q71RC2 724 aaKnown RBP eCLIP9.59□□□□□ -0.87
RFFL-209ENST00000581265 GRAMD2AQ8IUY3 354 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 CTAGE4Q8IX94 777 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 CDYL2Q8N8U2 506 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 OR9A2Q8NGT5 310 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 DCAKDQ8WVC6 231 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 KAT2AQ92830 837 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 STARD4Q96DR4 205 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 C11orf24Q96F05 449 aaPredicted RBP9.59□□□□□ -0.87
RFFL-209ENST00000581265 PIP5K1AQ99755 562 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 STMN4Q9H169 189 aaPredicted RBP9.59□□□□□ -0.87
RFFL-209ENST00000581265 ANKRA2Q9H9E1 313 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 SLC35C2Q9NQQ7 365 aa9.59□□□□□ -0.87
RFFL-209ENST00000581265 EIF3LQ9Y262 564 aaKnown RBP9.59□□□□□ -0.87
RFFL-209ENST00000581265 NSD1Q96L73 2696 aaPredicted RBP9.59□□□□□ -0.87
RFFL-209ENST00000581265 ROS1P08922 2347 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 CSPG4Q6UVK1 2322 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 GNG14A0A1W2PPG7 69 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 POC1B-GALNT4F8VUJ3 575 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 ARHGEF9O43307 516 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 CTIFO43310 598 aaKnown RBP9.58□□□□□ -0.88
RFFL-209ENST00000581265 NME6O75414 186 aaPredicted RBP9.58□□□□□ -0.88
RFFL-209ENST00000581265 SUPT7LO94864 414 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 SNRPAP09012 282 aaKnown RBP9.58□□□□□ -0.88
RFFL-209ENST00000581265 PEPDP12955 493 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 IMPDH1P20839 514 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 IL12BP29460 328 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 MC3RP41968 323 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 DSCR4P56555 118 aaPredicted RBP9.58□□□□□ -0.88
RFFL-209ENST00000581265 CLDN15P56746 228 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 PSG6Q00889 435 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 CKAP4Q07065 602 aaKnown RBP9.58□□□□□ -0.88
RFFL-209ENST00000581265 FAM27E3Q08E93 113 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 HEPACAMQ14CZ8 416 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 ERCC6LQ2NKX8 1250 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 UNC50Q53HI1 259 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 SPIN4Q56A73 249 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 TCHHL1Q5QJ38 904 aaPredicted RBP9.58□□□□□ -0.88
RFFL-209ENST00000581265 ZNF678Q5SXM1 525 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 FAM219BQ5XKK7 198 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 NPSR1Q6W5P4 371 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 TIFABQ6ZNK6 161 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 CHMP1BQ7LBR1 199 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 LRRC75A-AS1Q8N1F1 130 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 FADS6Q8N9I5 356 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 OR4N2Q8NGD1 307 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 METTL6Q8TCB7 284 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 C16orf78Q8WTQ4 265 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 PIGTQ969N2 578 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 WFIKKN1Q96NZ8 548 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 ZNF382Q96SR6 550 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 ACPTQ9BZG2 426 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 SHCBP1LQ9BZQ2 653 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 FOLH1BQ9HBA9 442 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 PFDN4Q9NQP4 134 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 GIMAP4Q9NUV9 329 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 SIRT5Q9NXA8 310 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 TAS2R9Q9NYW1 312 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 DMGDHQ9UI17 866 aaKnown RBP9.58□□□□□ -0.88
RFFL-209ENST00000581265 DKKL1Q9UK85 242 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 TESMINQ9Y4I5 508 aa9.58□□□□□ -0.88
RFFL-209ENST00000581265 FN1P02751 2386 aaKnown RBP9.58□□□□□ -0.88
RFFL-209ENST00000581265 TLN2Q9Y4G6 2542 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 VPS13CQ709C8 3753 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 A0A087WV62 115 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 SERTM1A2A2V5 107 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 SLC22A20A6NK97 555 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 DEFB108AA8MXU0 73 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 LINC01387J3KSC0 135 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 SMAD7O15105 426 aaKnown RBP9.57□□□□□ -0.88
RFFL-209ENST00000581265 PCDH7O60245 1069 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 FADS1O60427 444 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 DLX3O60479 287 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 TNFRSF21O75509 655 aa9.57□□□□□ -0.88
RFFL-209ENST00000581265 TAC1P20366 129 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms