RNA–Protein interactions for RNA: ENST00000581166.5

SUPT4H1-205, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-205ENST00000581166 C2orf72A6NCS6 295 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 TTC36A6NLP5 189 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 PEX11AO75192 247 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 SKAP2O75563 359 aaPredicted RBP12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 CBR3O75828 277 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 ZWINTO95229 277 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 HSPA4LO95757 839 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 SERPINE1P05121 402 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 MYZAPP0CAP1 466 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 DHRS4L1P0CG22 281 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 DDX5P17844 614 aaKnown RBP12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 GPC1P35052 558 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 PTGER4P35408 488 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 CRYZQ08257 329 aaKnown RBP12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 HSPB3Q12988 150 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 TOMM20Q15388 145 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 ZNHIT3Q15649 155 aaPredicted RBP12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 CHI3L2Q15782 390 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 ATP6AP1LQ52LC2 224 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 NHSL2Q5HYW2 709 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 C1orf185Q5T7R7 199 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 CES4AQ5XG92 561 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 LRIG3Q6UXM1 1119 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 R3HCC1LQ7Z5L2 792 aaKnown RBP12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 WDSUB1Q8N9V3 476 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 LILRB4Q8NHJ6 448 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 RNF138Q8WVD3 245 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 TIMP4Q99727 224 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 LMF2Q9BU23 707 aaKnown RBP12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 Q9N2J8 555 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 ACSS1Q9NUB1 689 aaPredicted RBP12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 ALKBH4Q9NXW9 302 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 GIMAP2Q9UG22 337 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 ATP6V1HQ9UI12 483 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 CBLCQ9ULV8 474 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 ADGRG4Q8IZF6 3080 aa12.82□□□□□ -0.36
SUPT4H1-205ENST00000581166 C19orf84I3L1E1 186 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 ITM2AO43736 263 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 LYPLA1O75608 230 aaPredicted RBP12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 SNUPNO95149 360 aaKnown RBP12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 GLI4P10075 376 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 PRPS2P11908 318 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 COX6B1P14854 86 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 RPL3P39023 403 aaKnown RBP12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 MANFP55145 182 aaKnown RBP12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 GAB1Q13480 694 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 C6orf136Q5SQH8 315 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 VASNQ6EMK4 673 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 PLCZ1Q86YW0 608 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 CCDC71Q8IV32 467 aaPredicted RBP12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 ULK2Q8IYT8 1036 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 FAM83FQ8NEG4 500 aaPredicted RBP12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 OR10Q1Q8NGQ4 319 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 EFHD2Q96C19 240 aaPredicted RBP12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 KCNK9Q9NPC2 374 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 SERHLQ9NQF3 203 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 NTMQ9P121 344 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 MRTO4Q9UKD2 239 aaKnown RBP12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 MAPRE3Q9UPY8 281 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 SLC6A5Q9Y345 797 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 WIF1Q9Y5W5 379 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 NOTCH2Q04721 2471 aa12.81□□□□□ -0.36
SUPT4H1-205ENST00000581166 AHRRA9YTQ3 701 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 FAM47E-STBD1D6RA91 191 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 SCAMP2O15127 329 aaKnown RBP12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 CYP4B1P13584 511 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 GRK2P25098 689 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 HPCAL1P37235 193 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 KIR3DL1P43629 444 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 ABCE1P61221 599 aaKnown RBP12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 MPP2Q14168 576 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 MLC1Q15049 377 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 DECR1Q16698 335 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 EIPR1Q53HC9 387 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 WIPI1Q5MNZ9 446 aaPredicted RBP12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 YRDCQ86U90 279 aaKnown RBP12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 PM20D2Q8IYS1 436 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 FNDC5Q8NAU1 212 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 CEP70Q8NHQ1 597 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 HOXB13Q92826 284 aaPredicted RBP12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 TUBGCP3Q96CW5 907 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 DTNBP1Q96EV8 351 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 PRDM14Q9GZV8 571 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 C3orf14Q9HBI5 128 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 RAP2CQ9Y3L5 183 aa12.8□□□□□ -0.36
SUPT4H1-205ENST00000581166 ERLIN1O75477 346 aa12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 IL33O95760 270 aa12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 SNRPB2P08579 225 aaKnown RBP12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 PRF1P14222 555 aa12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 BMP7P18075 431 aa12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 GABRA3P34903 492 aa12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 EVI2BP34910 448 aa12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 MAP3K8P41279 467 aa12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 ZFP36L2P47974 494 aaKnown RBP12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 GAS1P54826 345 aa12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 PSMD4P55036 377 aaKnown RBP12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 MAD2L1Q13257 205 aaPredicted RBP12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 PTGR1Q14914 329 aa12.79□□□□□ -0.36
SUPT4H1-205ENST00000581166 SF3B4Q15427 424 aaKnown RBP eCLIP12.79□□□□□ -0.361e-15■■■■■ 28
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms