RNA–Protein interactions for RNA: ENST00000578630.1

ERBB2-208, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 2

Gene ERBB2, Length 874 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-208ENST00000578630 SH2D2AQ9NP31 389 aa10.6□□□□□ -0.71
ERBB2-208ENST00000578630 DUSP22Q9NRW4 184 aa10.6□□□□□ -0.71
ERBB2-208ENST00000578630 CHCHD2Q9Y6H1 151 aaPredicted RBP10.6□□□□□ -0.71
ERBB2-208ENST00000578630 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.6□□□□□ -0.71
ERBB2-208ENST00000578630 RNF103-CHMP3A0A140T963 221 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 GMNCA6NCL1 334 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 C9JVG2 144 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 ACOT7O00154 380 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 UGT2B11O75310 529 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 KRT75O95678 551 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 IL33O95760 270 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 AGR2O95994 175 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 EDN3P14138 238 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 MAP3K8P41279 467 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 CASP3P42574 277 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 RFX3P48380 749 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 TRPC1P48995 793 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 POU6F2P78424 691 aaPredicted RBP10.59□□□□□ -0.71
ERBB2-208ENST00000578630 TXNL4AP83876 142 aaKnown RBP10.59□□□□□ -0.71
ERBB2-208ENST00000578630 ELOAQ14241 798 aaKnown RBP10.59□□□□□ -0.71
ERBB2-208ENST00000578630 IGFBP7Q16270 282 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 TMEM81Q6P7N7 255 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 BLOC1S3Q6QNY0 202 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 BNC2Q6ZN30 1099 aaPredicted RBP10.59□□□□□ -0.71
ERBB2-208ENST00000578630 WDR53Q7Z5U6 358 aaPredicted RBP10.59□□□□□ -0.71
ERBB2-208ENST00000578630 CPLX4Q7Z7G2 160 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 SLC22A16Q86VW1 577 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 CPSF7Q8N684 471 aaKnown RBP10.59□□□□□ -0.71
ERBB2-208ENST00000578630 COX18Q8N8Q8 333 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 GALNT11Q8NCW6 608 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 OR2M7Q8NG81 312 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 OR9I1Q8NGQ6 314 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 OR5AK3PQ8NH89 298 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 PIK3R3Q92569 461 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 NR4A3Q92570 626 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 MIB2Q96AX9 1013 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 EFHD2Q96C19 240 aaPredicted RBP10.59□□□□□ -0.71
ERBB2-208ENST00000578630 SPDL1Q96EA4 605 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 G6PC3Q9BUM1 346 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 BTBD2Q9BX70 525 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 ANGPTL4Q9BY76 406 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 NSRP1Q9H0G5 558 aaKnown RBP10.59□□□□□ -0.71
ERBB2-208ENST00000578630 IL1RL2Q9HB29 575 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 SDHAF3Q9NRP4 125 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 EXD2Q9NVH0 621 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 CNOT11Q9UKZ1 510 aaKnown RBP10.59□□□□□ -0.71
ERBB2-208ENST00000578630 BOKQ9UMX3 212 aaPredicted RBP10.59□□□□□ -0.71
ERBB2-208ENST00000578630 BOD1L1Q8NFC6 3051 aa10.59□□□□□ -0.71
ERBB2-208ENST00000578630 RP1L1Q8IWN7 2480 aaPredicted RBP10.58□□□□□ -0.72
ERBB2-208ENST00000578630 GXYLT2A0PJZ3 443 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 NPIPA5E9PKD4 350 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 G3V3Y1 287 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 J3QKU1 62 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 TFECO14948 347 aaPredicted RBP10.58□□□□□ -0.72
ERBB2-208ENST00000578630 ZCCHC18P0CG32 403 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 ACP2P11117 423 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 ZNF24P17028 368 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 ATP6V1C1P21283 382 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 LCN1P31025 176 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 LSP1P33241 339 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 MASP1P48740 699 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 DNASE1L1P49184 302 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 PPIAP62937 165 aaKnown RBP10.58□□□□□ -0.72
ERBB2-208ENST00000578630 GNGT1P63211 74 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 FOXK1P85037 733 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 PMP22Q01453 160 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 SF3A3Q12874 501 aaKnown RBP eCLIP10.58□□□□□ -0.72
ERBB2-208ENST00000578630 DUSP5Q16690 384 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 PRR30Q53SZ7 412 aaPredicted RBP10.58□□□□□ -0.72
ERBB2-208ENST00000578630 C6orf10Q5SRN2 563 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 ATAD3BQ5T9A4 648 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 PRAMEF20Q5VT98 475 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 ZNF324BQ6AW86 544 aaPredicted RBP10.58□□□□□ -0.72
ERBB2-208ENST00000578630 FUNDC1Q8IVP5 155 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 FAM110BQ8TC76 370 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 TSPEARQ8WU66 669 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 HGDQ93099 445 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 VPS33AQ96AX1 596 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 DTNBP1Q96EV8 351 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 RMND5BQ96G75 393 aaPredicted RBP10.58□□□□□ -0.72
ERBB2-208ENST00000578630 SLC35G5Q96KT7 338 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 JSRP1Q96MG2 331 aaPredicted RBP10.58□□□□□ -0.72
ERBB2-208ENST00000578630 FRMD6Q96NE9 622 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 OR7D2Q96RA2 312 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 NODALQ96S42 347 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 ELAC2Q9BQ52 826 aaKnown RBP10.58□□□□□ -0.72
ERBB2-208ENST00000578630 SLC35A5Q9BS91 424 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 HOXD1Q9GZZ0 328 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 HHATLQ9HCP6 504 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 ZFP64Q9NPA5 681 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 DEPPQ9NTK1 212 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 GPATCH2Q9NW75 528 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 KLRF1Q9NZS2 232 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 B4GALT7Q9UBV7 327 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 SEC14L3Q9UDX4 400 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 NPIPA1Q9UND3 350 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 NTNG1Q9Y2I2 539 aa10.58□□□□□ -0.72
ERBB2-208ENST00000578630 A0A1W2PP18 115 aa10.57□□□□□ -0.72
ERBB2-208ENST00000578630 ASNA1O43681 348 aa10.57□□□□□ -0.72
ERBB2-208ENST00000578630 CCDC22O60826 627 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms