RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 SLC30A6Q6NXT4 461 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 PAOXQ6QHF9 649 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 CYP20A1Q6UW02 462 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 CCDC91Q7Z6B0 441 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 MILR1Q7Z6M3 343 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 GALNT10Q86SR1 603 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 EXOC3L1Q86VI1 746 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 PLCZ1Q86YW0 608 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 GSPT2Q8IYD1 628 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 DND1Q8IYX4 353 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 CLYBLQ8N0X4 340 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 OR2L13Q8N349 312 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 OR1J4Q8NGS1 313 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 OR4C3Q8NH37 302 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 LILRB1Q8NHL6 650 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 SELENOMQ8WWX9 145 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 WNT2BQ93097 391 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 EFHD2Q96C19 240 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 INTS12Q96CB8 462 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 KLHL29Q96CT2 875 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 L3HYPDHQ96EM0 354 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 HSPBAP1Q96EW2 488 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 ART5Q96L15 291 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 COL21A1Q96P44 957 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 MDFIQ99750 246 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 PELOQ9BRX2 385 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 OSBPL11Q9BXB4 747 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 BRINP2Q9C0B6 783 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 RAB17Q9H0T7 212 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 OPN3Q9H1Y3 402 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 DSN1Q9H410 356 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 GLIPR2Q9H4G4 154 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 BRF2Q9HAW0 419 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 SLC35C2Q9NQQ7 365 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 SIRT3Q9NTG7 399 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 TAS2R7Q9NYW3 318 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 C6orf203Q9P0P8 240 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 VPS29Q9UBQ0 182 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 B4GALT7Q9UBV7 327 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 GIMAP2Q9UG22 337 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 MCM8Q9UJA3 840 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 C19orf53Q9UNZ5 99 aaPredicted RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 CAMK2AQ9UQM7 478 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 UTP11Q9Y3A2 253 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 ZNF337Q9Y3M9 751 aa4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 TNPO3Q9Y5L0 923 aaKnown RBP4.01□□□□□ -1.77
PPP4R1-209ENST00000578329 ALPK2Q86TB3 2170 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 CENPVL1A0A0U1RR11 272 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 OR2M5A3KFT3 312 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 TRIM64A6NGJ6 449 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 TRIM64BA6NI03 449 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 ESPNB1AK53 854 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 TMEM233B4DJY2 109 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 DVL2O14641 736 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 TP53I11O14683 189 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 ACOX3O15254 700 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 CTIFO43310 598 aaKnown RBP4□□□□□ -1.77
PPP4R1-209ENST00000578329 RIPK2O43353 540 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 PCDH7O60245 1069 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 BCAS1O75363 584 aaPredicted RBP4□□□□□ -1.77
PPP4R1-209ENST00000578329 ERN1O75460 977 aaKnown RBP4□□□□□ -1.77
PPP4R1-209ENST00000578329 CBR3O75828 277 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 SOX30O94993 753 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 ZWINTO95229 277 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 NTN1O95631 604 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 LY6G6DO95868 133 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 ACTL6AO96019 429 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 OTCP00480 354 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 JUNP05412 331 aaKnown RBP4□□□□□ -1.77
PPP4R1-209ENST00000578329 ABHD2P08910 425 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 RBP1P09455 135 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 TMIGD3P0DMS9 266 aaPredicted RBP4□□□□□ -1.77
PPP4R1-209ENST00000578329 ACP2P11117 423 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 CREB1P16220 341 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 EFNA1P20827 205 aaPredicted RBP4□□□□□ -1.77
PPP4R1-209ENST00000578329 SRD5A2P31213 254 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 TLX1P31314 330 aaPredicted RBP4□□□□□ -1.77
PPP4R1-209ENST00000578329 NTF4P34130 210 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 PCYT1AP49585 367 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 PNLIPRP2P54317 469 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 TRA2BP62995 288 aaKnown RBP4□□□□□ -1.77
PPP4R1-209ENST00000578329 SORDQ00796 357 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 SRYQ05066 204 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 ZNF844Q08AG5 666 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 PLCXD2Q0VAA5 305 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 CSTF3Q12996 717 aaKnown RBP4□□□□□ -1.77
PPP4R1-209ENST00000578329 SNTA1Q13424 505 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 PDE7AQ13946 482 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 CD226Q15762 336 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 DDX59Q5T1V6 619 aaKnown RBP eCLIP4□□□□□ -1.77
PPP4R1-209ENST00000578329 ANKRD26P1Q6NSI1 321 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 C8orf74Q6P047 294 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 GPRIN3Q6ZVF9 776 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 OLIG3Q7RTU3 272 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 ZNF551Q7Z340 670 aaPredicted RBP4□□□□□ -1.77
PPP4R1-209ENST00000578329 ZNF550Q7Z398 422 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 TRIM46Q7Z4K8 759 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 LUZP2Q86TE4 346 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 MARCH3Q86UD3 253 aa4□□□□□ -1.77
PPP4R1-209ENST00000578329 PACS2Q86VP3 889 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms