RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 GDF1P27539 372 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 DIO3P55073 304 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 PRR5P85299 388 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 OCRLQ01968 901 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 GAB1Q13480 694 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 TIGD3Q6B0B8 471 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 RPTNQ6XPR3 784 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 SZRD1Q7Z422 152 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 CD163Q86VB7 1156 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 CDRT4Q8N9R6 151 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 MS4A4EQ96PG1 132 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 PHF12Q96QT6 1004 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 SH3GL2Q99962 352 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 DUSP26Q9BV47 211 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 EQTNQ9NQ60 294 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 PLEKHB1Q9UF11 243 aaPredicted RBP21.5■■□□□ 1.03
SNF8-217ENST00000576353 C15orf41Q9Y2V0 281 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 LIPGQ9Y5X9 500 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 COL12A1Q99715 3063 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 DOPEY1Q5JWR5 2465 aa21.5■■□□□ 1.03
SNF8-217ENST00000576353 HMGB1P1B2RPK0 211 aaPredicted RBP21.49■■□□□ 1.03
SNF8-217ENST00000576353 NPIPA2E9PIF3 369 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 E9PLN8 166 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 NPIPA3F8WFD2 350 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 BCKDKO14874 412 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 GABRA3P34903 492 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 PSMD4P55036 377 aaKnown RBP21.49■■□□□ 1.03
SNF8-217ENST00000576353 TTMPQ5BVD1 217 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 FNDC7Q5VTL7 733 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 OGFOD2Q6N063 350 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 ZCCHC12Q6PEW1 402 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 ANGPTL8Q6UXH0 198 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 WDR53Q7Z5U6 358 aaPredicted RBP21.49■■□□□ 1.03
SNF8-217ENST00000576353 CAMKMTQ7Z624 323 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 OR1J4Q8NGS1 313 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 ZNF75CPQ92670 426 aaPredicted RBP21.49■■□□□ 1.03
SNF8-217ENST00000576353 SARAFQ96BY9 339 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 EFHD2Q96C19 240 aaPredicted RBP21.49■■□□□ 1.03
SNF8-217ENST00000576353 GNRHR2Q96P88 292 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 VKORC1Q9BQB6 163 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 DPY30Q9C005 99 aa21.49■■□□□ 1.03
SNF8-217ENST00000576353 MARCOQ9UEW3 520 aaPredicted RBP21.49■■□□□ 1.03
SNF8-217ENST00000576353 A1L4Q6 167 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 GNB5O14775 395 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 TRAPPC6AO75865 159 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 KCNH1O95259 989 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 KITP10721 976 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 PTGDSP41222 190 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 SMSP52788 366 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 PGS1Q32NB8 556 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 MAMDC2Q7Z304 686 aaPredicted RBP21.48■■□□□ 1.03
SNF8-217ENST00000576353 SPATA19Q7Z5L4 167 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 WDR75Q8IWA0 830 aaKnown RBP21.48■■□□□ 1.03
SNF8-217ENST00000576353 PSMA8Q8TAA3 256 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 GPR151Q8TDV0 419 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 HOXB13Q92826 284 aaPredicted RBP21.48■■□□□ 1.03
SNF8-217ENST00000576353 UBQLN3Q9H347 655 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 TP63Q9H3D4 680 aaPredicted RBP21.48■■□□□ 1.03
SNF8-217ENST00000576353 GALNT9Q9HCQ5 603 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 NEUROD4Q9HD90 331 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 SIRT3Q9NTG7 399 aaPredicted RBP21.48■■□□□ 1.03
SNF8-217ENST00000576353 ACAD8Q9UKU7 415 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 SNX8Q9Y5X2 465 aa21.48■■□□□ 1.03
SNF8-217ENST00000576353 SPTAN1Q13813 2472 aaKnown RBP21.47■■□□□ 1.03
SNF8-217ENST00000576353 GIMAP1-GIMAP5A0A087WTJ2 511 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 SDHDO14521 159 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 SNPHO15079 494 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 NKX2-2O95096 273 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 IL33O95760 270 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 HPNP05981 417 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 PRIM2P49643 509 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 GXYLT1Q4G148 440 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 C3P1Q6ZMU1 363 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 PIWIL2Q8TC59 973 aaKnown RBP21.47■■□□□ 1.03
SNF8-217ENST00000576353 PHF10Q8WUB8 498 aaKnown RBP21.47■■□□□ 1.03
SNF8-217ENST00000576353 NUDT8Q8WV74 236 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 SLC9A6Q92581 669 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 FAM120BQ96EK7 910 aaKnown RBP21.47■■□□□ 1.03
SNF8-217ENST00000576353 DTNBP1Q96EV8 351 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 GIMAP5Q96F15 307 aa21.47■■□□□ 1.03
SNF8-217ENST00000576353 ZCCHC3Q9NUD5 404 aaKnown RBP21.47■■□□□ 1.03
SNF8-217ENST00000576353 C2orf72A6NCS6 295 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 ADAM10O14672 748 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 CFLARO15519 480 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 CBR3O75828 277 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 C6orf47O95873 294 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 CYP4B1P13584 511 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 PTPN6P29350 595 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 MAP3K8P41279 467 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 CCT3P49368 545 aaKnown RBP21.46■■□□□ 1.03
SNF8-217ENST00000576353 TOMM20Q15388 145 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 SPDYE7PQ495Y7 208 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 MFSD12Q6NUT3 480 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 MRGPRGQ86SM5 289 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 ZNF808Q8N4W9 903 aaPredicted RBP21.46■■□□□ 1.03
SNF8-217ENST00000576353 OR56A1Q8NGH5 318 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 NEIL3Q8TAT5 605 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 ITLN2Q8WWU7 325 aaPredicted RBP21.46■■□□□ 1.03
SNF8-217ENST00000576353 MOAP1Q96BY2 351 aa21.46■■□□□ 1.03
SNF8-217ENST00000576353 SLC6A15Q9H2J7 730 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms