RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 ART3Q13508 389 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 TUBA3CQ13748 450 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 RGNQ15493 299 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 ATAD3BQ5T9A4 648 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 TUBA3EQ6PEY2 450 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 LYPD8Q6UX82 237 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 ZADH2Q8N4Q0 377 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 OR8J3Q8NGG0 315 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 PIK3R3Q92569 461 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 CDS1Q92903 461 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 OMA1Q96E52 524 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 OTUB1Q96FW1 271 aaPredicted RBP15.75■□□□□ 0.11
NUP88-210ENST00000574867 WBP1Q96G27 269 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 RMND5BQ96G75 393 aaPredicted RBP15.75■□□□□ 0.11
NUP88-210ENST00000574867 IL12BP29460 328 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 CRATP43155 626 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 MRPS22P82650 360 aaKnown RBP15.75■□□□□ 0.11
NUP88-210ENST00000574867 OC90Q02509 493 aaPredicted RBP15.75■□□□□ 0.11
NUP88-210ENST00000574867 CAPRIN1Q14444 709 aaKnown RBP15.75■□□□□ 0.11
NUP88-210ENST00000574867 NTRK2Q16620 822 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 ZNF791Q3KP31 576 aaPredicted RBP15.75■□□□□ 0.11
NUP88-210ENST00000574867 LACTB2Q53H82 288 aaPredicted RBP15.75■□□□□ 0.11
NUP88-210ENST00000574867 CYP4Z2PQ8N1L4 340 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 OR4N2Q8NGD1 307 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 TMBIM1Q969X1 311 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 SLC35A4Q96G79 324 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 SGCZQ96LD1 299 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 ZBTB20Q9HC78 741 aaPredicted RBP15.75■□□□□ 0.11
NUP88-210ENST00000574867 TP53TG5Q9Y2B4 290 aa15.75■□□□□ 0.11
NUP88-210ENST00000574867 OR6C70A6NIJ9 312 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 HMGN4O00479 90 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 DPM1O60762 260 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 C1QCP02747 245 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 ESRRAP11474 423 aaPredicted RBP15.74■□□□□ 0.11
NUP88-210ENST00000574867 GPX2P18283 190 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 CALB2P22676 271 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 CASP9P55211 416 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 COX20Q5RI15 118 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 NANOGP8Q6NSW7 305 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 PRR22Q8IZ63 422 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 BCORP1Q8N888 145 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 GOLM1Q8NBJ4 401 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 CHDHQ8NE62 594 aaPredicted RBP15.74■□□□□ 0.11
NUP88-210ENST00000574867 DIO2Q92813 273 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 NSL1Q96IY1 281 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 SLC39A3Q9BRY0 314 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 G6PC3Q9BUM1 346 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 NANOGQ9H9S0 305 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 NDE1Q9NXR1 346 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 LRFN1Q9P244 771 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 GXYLT2A0PJZ3 443 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 TP53I11O14683 189 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 TSPAN2O60636 221 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 REM1O75628 298 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 CBX6O95503 412 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 IL33O95760 270 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 OR12D1P0DN82 309 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 BMP2P12643 396 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 LCN1P31025 176 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 CD96P40200 585 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 CPA2P48052 419 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 PNLIPRP2P54317 469 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 DSTNP60981 165 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 EFR3AQ14156 821 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.74■□□□□ 0.11
NUP88-210ENST00000574867 DCST2Q5T1A1 773 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 ZNF468Q5VIY5 522 aaPredicted RBP15.74■□□□□ 0.11
NUP88-210ENST00000574867 HEPHL1Q6MZM0 1159 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 IL20RBQ6UXL0 311 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 RTL4Q6ZR62 310 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 ASB18Q6ZVZ8 466 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 C16orf62Q7Z3J2 963 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 XAGE5Q8WWM1 108 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 HOPXQ9BPY8 73 aaPredicted RBP15.74■□□□□ 0.11
NUP88-210ENST00000574867 THUMPD3Q9BV44 507 aaKnown RBP15.74■□□□□ 0.11
NUP88-210ENST00000574867 IKZF5Q9H5V7 419 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 ANKRD10Q9NXR5 420 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 PLA2G3Q9NZ20 509 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 LIPT1Q9Y234 373 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 EPG5Q9HCE0 2579 aa15.74■□□□□ 0.11
NUP88-210ENST00000574867 CCT8L1PA6NM43 557 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 KCNK2O95069 426 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 PDGFAP04085 211 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 ETFAP13804 333 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 TNFSF10P50591 281 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 MTPNP58546 118 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 RPP38P78345 283 aaKnown RBP15.73■□□□□ 0.11
NUP88-210ENST00000574867 OR1C1Q15619 314 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 FAM110BQ8TC76 370 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 RAB8BQ92930 207 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 COL21A1Q96P44 957 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 SECISBP2Q96T21 854 aaKnown RBP15.73■□□□□ 0.11
NUP88-210ENST00000574867 GPATCH1Q9BRR8 931 aaKnown RBP15.73■□□□□ 0.11
NUP88-210ENST00000574867 P2RX2Q9UBL9 471 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 AP3M1Q9Y2T2 418 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 KCNE3Q9Y6H6 103 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 TNRC6AQ8NDV7 1962 aaKnown RBP15.73■□□□□ 0.11
NUP88-210ENST00000574867 ITPR1Q14643 2758 aa15.73■□□□□ 0.11
NUP88-210ENST00000574867 TMEM247A6NEH6 219 aa15.72■□□□□ 0.11
NUP88-210ENST00000574867 SLC6A2P23975 617 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms