RNA–Protein interactions for RNA: ENST00000572346.5

NPLOC4-207, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-207ENST00000572346 SH2D2AQ9NP31 389 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 ALKBH4Q9NXW9 302 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 SPRR3Q9UBC9 169 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 CES1P1Q9UKY3 287 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 PRRC2AP48634 2157 aaKnown RBP13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 NINQ8N4C6 2090 aa13.59□□□□□ -0.23
NPLOC4-207ENST00000572346 E9PBE3 544 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 HRKO00198 91 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 NADKO95544 446 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 RFPL3SP0C7P2 107 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 CPMP14384 443 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 PRPS1L1P21108 318 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 NT5EP21589 574 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 NTSP30990 170 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 LSP1P33241 339 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 ARFIP2P53365 341 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 NME5P56597 212 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 CLDN8P56748 225 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 STX1BP61266 288 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 SLC25A35Q3KQZ1 300 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 FAM180BQ6P0A1 224 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 DGAT2L6Q6ZPD8 337 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 ST13P4Q8IZP2 240 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 SLC22A8Q8TCC7 542 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 PAQR8Q8TEZ7 354 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 PPWD1Q96BP3 646 aaKnown RBP13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 MTERF3Q96E29 417 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 SPACA9Q96E40 222 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 ZNF317Q96PQ6 595 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 TMEM120AQ9BXJ8 343 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 EXO5Q9H790 373 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 ZNF703Q9H7S9 590 aaPredicted RBP13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 SLC35C2Q9NQQ7 365 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 AIG1Q9NVV5 245 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 FREM3P0C091 2139 aa13.58□□□□□ -0.24
NPLOC4-207ENST00000572346 SCAMP2O15127 329 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 CTAG2O75638 210 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 ALDOCP09972 364 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 SLC35E2P0CK97 266 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 GABRA1P14867 456 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 IDO1P14902 403 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 KCNJ2P63252 427 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 SNTB1Q13884 538 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 GSTA3Q16772 222 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 KRTAP21-3Q3LHN1 58 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 CPTPQ5TA50 214 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 RIPPLY2Q5TAB7 128 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 PRAMEF20Q5VT98 475 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 TMEM198Q66K66 360 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 ANKRD26P1Q6NSI1 321 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 ARSKQ6UWY0 536 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 WDR53Q7Z5U6 358 aaPredicted RBP13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 CPLX4Q7Z7G2 160 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 ZZZ3Q8IYH5 903 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 CCDC116Q8IYX3 515 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 LRRC25Q8N386 305 aaPredicted RBP13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 SLC15A4Q8N697 577 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 KRTCAP2Q8N6L1 136 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 RIT1Q92963 219 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 CNRIP1Q96F85 164 aaPredicted RBP13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 FBXL20Q96IG2 436 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 ART5Q96L15 291 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 MARK4Q96L34 752 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 ZBTB18Q99592 522 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 TMUB1Q9BVT8 246 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 BRINP2Q9C0B6 783 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 FAM107BQ9H098 131 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 PROK2Q9HC23 129 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 ATAD3AQ9NVI7 634 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 DNAJB12Q9NXW2 375 aaKnown RBP13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 FAM53CQ9NYF3 392 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 BOKQ9UMX3 212 aaPredicted RBP13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 TRIM33Q9UPN9 1127 aa13.57□□□□□ -0.24
NPLOC4-207ENST00000572346 GMNCA6NCL1 334 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 LRRC3CA6NJW4 275 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 FAM47E-STBD1D6RA91 191 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 PDPK1O15530 556 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 CD99P14209 185 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 NCF2P19878 526 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 MPIP34949 423 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 SEC24CP53992 1094 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 CLNS1AP54105 237 aaKnown RBP13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 ZNF267Q14586 743 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 PGS1Q32NB8 556 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 FBXW8Q8N3Y1 598 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 ZFP28Q8NHY6 868 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 NEIL3Q8TAT5 605 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 DOK4Q8TEW6 326 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 NINJ1Q92982 152 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 FOXC2Q99958 501 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 POLDIP3Q9BY77 421 aaKnown RBP13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 CXXC4Q9H2H0 198 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 SLC6A15Q9H2J7 730 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 ZFP64Q9NPA5 681 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 ACKR4Q9NPB9 350 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 CCM2LQ9NUG4 571 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 TAS2R7Q9NYW3 318 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 KLHL14Q9P2G3 628 aa13.56□□□□□ -0.24
NPLOC4-207ENST00000572346 B4GALT7Q9UBV7 327 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms