RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, human

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB40B-204	ENST00000571554	PPCS	Q9HAB8	311 aa		12.51	□□□□□ -0.41
RAB40B-204	ENST00000571554	LRTM1	Q9HBL6	345 aa		12.51	□□□□□ -0.41
RAB40B-204	ENST00000571554	DDX18	Q9NVP1	670 aa	Known RBP	12.51	□□□□□ -0.41
RAB40B-204	ENST00000571554	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
RAB40B-204	ENST00000571554	DKKL1	Q9UK85	242 aa		12.51	□□□□□ -0.41
RAB40B-204	ENST00000571554	RPH3A	Q9Y2J0	694 aa	Predicted RBP	12.51	□□□□□ -0.41
RAB40B-204	ENST00000571554	L3MBTL1	Q9Y468	752 aa		12.51	□□□□□ -0.41
RAB40B-204	ENST00000571554	PCDHGB3	Q9Y5G1	929 aa		12.51	□□□□□ -0.41
RAB40B-204	ENST00000571554		V9GYY5	206 aa	Predicted RBP	12.51	□□□□□ -0.41
RAB40B-204	ENST00000571554	DOCK7	Q96N67	2140 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554		H0Y3Z8	333 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	UPK1A	O00322	258 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	SLC28A1	O00337	649 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	DVL2	O14641	736 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	TRIM13	O60858	407 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	COQ9	O75208	318 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	CBR3	O75828	277 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	IL2RA	P01589	272 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	POU3F2	P20265	443 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	EFNA1	P20827	205 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	GRK2	P25098	689 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	ALDH3A1	P30838	453 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	CEACAM8	P31997	349 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	GSTM5	P46439	218 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	NAA20	P61599	178 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	RPL38	P63173	70 aa	Known RBP	12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	IFFO1	Q0D2I5	559 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	EFR3A	Q14156	821 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	KIAA0040	Q15053	153 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	GALNTL6	Q49A17	601 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	ZNF385B	Q569K4	471 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	NHSL2	Q5HYW2	709 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	NSUN5P2	Q63ZY6	315 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	ARSK	Q6UWY0	536 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554		Q6ZSR9	355 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	ZCCHC23	Q6ZST2	131 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	IFNE	Q86WN2	208 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	TRIM42	Q8IWZ5	723 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	DDIAS	Q8IXT1	998 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	CNPY4	Q8N129	248 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	BANP	Q8N9N5	519 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	C9orf106	Q8NAJ2	232 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	ZBTB9	Q96C00	473 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	TUBA1C	Q9BQE3	449 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	OR2B2	Q9GZK3	357 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	STMN4	Q9H169	189 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	EQTN	Q9NQ60	294 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	C1orf109	Q9NX04	203 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	TAS2R10	Q9NYW0	307 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	GIMAP2	Q9UG22	337 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	BAIAP2L1	Q9UHR4	511 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	MID2	Q9UJV3	735 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	C19orf53	Q9UNZ5	99 aa	Predicted RBP	12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554	CELSR1	Q9NYQ6	3014 aa		12.5	□□□□□ -0.41
RAB40B-204	ENST00000571554		A0A087WV62	115 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	GXYLT2	A0PJZ3	443 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	EEF1E1-BLOC1S5	C9J1V9	151 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554		H3BQF6	201 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	EEF1E1	O43324	174 aa	Known RBP	12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	RGS14	O43566	566 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	GMFG	O60234	142 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	ABCB7	O75027	752 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	ZWINT	O95229	277 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	ACTL6A	O96019	429 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	CREB1	P16220	341 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	SDC1	P18827	310 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	EVI2B	P34910	448 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	GPC1	P35052	558 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	GCK	P35557	465 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	DGKQ	P52824	942 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	PNLIPRP2	P54317	469 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	GAS1	P54826	345 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	GAB1	Q13480	694 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	RCAN2	Q14206	197 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	RFTN2	Q52LD8	501 aa	Predicted RBP	12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	CES4A	Q5XG92	561 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	KANK2	Q63ZY3	851 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	POMZP3	Q6PJE2	187 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	IKBIP	Q70UQ0	350 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	SZRD1	Q7Z422	152 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	GALNT10	Q86SR1	603 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	TRABD2A	Q86V40	505 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	OR4K17	Q8NGC6	315 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	FAM76A	Q8TAV0	307 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	FBXO30	Q8TB52	745 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	ELP4	Q96EB1	424 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	SFXN2	Q96NB2	322 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	SH3GL2	Q99962	352 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	RTN4R	Q9BZR6	473 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	PPP4R1L	Q9P1A2	415 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	KCNN3	Q9UGI6	736 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	DNAJC15	Q9Y5T4	150 aa		12.49	□□□□□ -0.41
RAB40B-204	ENST00000571554	CD8B2	A6NJW9	211 aa		12.48	□□□□□ -0.41
RAB40B-204	ENST00000571554	PLOD2	O00469	737 aa		12.48	□□□□□ -0.41
RAB40B-204	ENST00000571554	PDPK1	O15530	556 aa		12.48	□□□□□ -0.41
RAB40B-204	ENST00000571554	PRPH2	P23942	346 aa		12.48	□□□□□ -0.41
RAB40B-204	ENST00000571554	DPP4	P27487	766 aa		12.48	□□□□□ -0.41
RAB40B-204	ENST00000571554	SRD5A2	P31213	254 aa		12.48	□□□□□ -0.41
RAB40B-204	ENST00000571554	TIMP3	P35625	211 aa		12.48	□□□□□ -0.41
RAB40B-204	ENST00000571554	ASCL1	P50553	236 aa		12.48	□□□□□ -0.41

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