RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 LILRA6Q6PI73 481 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 IL20RBQ6UXL0 311 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 ZNF793Q6ZN11 406 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 RFPL4BQ6ZWI9 263 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 AMZ2Q86W34 360 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 LIX1LQ8IVB5 337 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 SLC37A3Q8NCC5 494 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 LRIG1Q96JA1 1093 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 LINC00615Q96LM1 132 aaPredicted RBP16.39■□□□□ 0.21
SCARF1-205ENST00000571272 KCNJ15Q99712 375 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 KLHL31Q9H511 634 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 NIPAL2Q9H841 368 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 EXTL2Q9UBQ6 330 aa16.39■□□□□ 0.21
SCARF1-205ENST00000571272 NUP210Q8TEM1 1887 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-205ENST00000571272 C12orf71A8MTZ7 269 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 AKAP8O43823 692 aaKnown RBP16.38■□□□□ 0.21
SCARF1-205ENST00000571272 CXCL14O95715 111 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 TRHRP34981 398 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-205ENST00000571272 DUSP2Q05923 314 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 TSPAN31Q12999 210 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 SF3A2Q15428 464 aaKnown RBP16.38■□□□□ 0.21
SCARF1-205ENST00000571272 TMEM107Q6UX40 140 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 NKAIN4Q8IVV8 208 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 SUN3Q8TAQ9 357 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 ZNF514Q96K75 400 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-205ENST00000571272 DDX31Q9H8H2 851 aaKnown RBP16.38■□□□□ 0.21
SCARF1-205ENST00000571272 TEKT2Q9UIF3 430 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 SLC13A4Q9UKG4 626 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 LANCL1O43813 399 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 PAHP00439 452 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 ST8SIA6P61647 398 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 MRPL28Q13084 256 aaKnown RBP16.38■□□□□ 0.21
SCARF1-205ENST00000571272 VASNQ6EMK4 673 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 MZT2AQ6P582 158 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 METAP1DQ6UB28 335 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-205ENST00000571272 TMEM91Q6ZNR0 172 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 KIAA0907Q7Z7F0 614 aaPredicted RBP16.38■□□□□ 0.21
SCARF1-205ENST00000571272 KLHL36Q8N4N3 616 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 DNAJC5GQ8N7S2 189 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 POGLUT1Q8NBL1 392 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 PXYLP1Q8TE99 480 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 ZSWIM3Q96MP5 696 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 ISG20L2Q9H9L3 353 aaKnown RBP16.38■□□□□ 0.21
SCARF1-205ENST00000571272 PELI2Q9HAT8 420 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 TAS2R7Q9NYW3 318 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 LIPT1Q9Y234 373 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 CDH10Q9Y6N8 788 aa16.38■□□□□ 0.21
SCARF1-205ENST00000571272 KIAA1549LQ6ZVL6 1849 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 SOCS6O14544 535 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 MOSPD3O75425 235 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 TAS2R38P59533 333 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 NTHL1P78549 312 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 REEP5Q00765 189 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 MAB21L1Q13394 359 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 DSG2Q14126 1118 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 AADACL4Q5VUY2 407 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 MRGPREQ86SM8 312 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 NR2C2APQ86WQ0 139 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 ZFPM2Q8WW38 1151 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 NACC2Q96BF6 587 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 VWCEQ96DN2 955 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 TBX5Q99593 518 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 AICDAQ9GZX7 198 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 BCL2L10Q9HD36 194 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 PTGFRNQ9P2B2 879 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 MAFFQ9ULX9 164 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 GPR34Q9UPC5 381 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 ZFR2Q9UPR6 939 aaKnown RBP16.37■□□□□ 0.21
SCARF1-205ENST00000571272 IRAK3Q9Y616 596 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 GSAPA4D1B5 854 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 SLC43A1O75387 559 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 FGF18O76093 207 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 NTSP30990 170 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 IFNGR2P38484 337 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 EOGTQ5NDL2 527 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 RASSF6Q6ZTQ3 369 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 C12orf40Q86WS4 652 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 OR51G2Q8NGK0 314 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 ZNF649Q9BS31 505 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 ZBP1Q9H171 429 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 WASH6PQ9NQA3 447 aa16.37■□□□□ 0.21
SCARF1-205ENST00000571272 SURF4O15260 269 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 TRIM3O75382 744 aaPredicted RBP16.36■□□□□ 0.21
SCARF1-205ENST00000571272 OMPP47874 163 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 OR3A3P47888 321 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 ADAM15Q13444 863 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 TRAM2Q15035 370 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 TCEAL5Q5H9L2 206 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 TRILQ7L0X0 811 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 OR8K5Q8NH50 307 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 OR5K2Q8NHB8 316 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 RFKQ969G6 155 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 FCRL4Q96PJ5 515 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 PINK1Q9BXM7 581 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 XKR8Q9H6D3 395 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 SLC28A3Q9HAS3 691 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 SLC23A1Q9UHI7 598 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 COL4A3Q01955 1670 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 A0A0A6YYD5 115 aa16.36■□□□□ 0.21
SCARF1-205ENST00000571272 A0A1W2PPV9 198 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms