RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 ARHGEF7Q14155 803 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CSHL1Q14406 222 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 PTPRCAPQ14761 206 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 PON3Q15166 354 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TEAD2Q15562 447 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TGFBIQ15582 683 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 FAM189A2Q15884 450 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ETFDHQ16134 617 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 PSG3Q16557 428 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 C18orf21Q32NC0 220 aaPredicted RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 NDUFAF6Q330K2 333 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 GTDC1Q4AE62 458 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ACTBL2Q562R1 376 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 XKR7Q5GH72 579 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CATSPEREQ5SY80 951 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 C1orf146Q5VVC0 180 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 RNLSQ5VYX0 342 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 FAM219BQ5XKK7 198 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 STEAP4Q687X5 459 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CGB2Q6NT52 195 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TMEM81Q6P7N7 255 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 LRRC8BQ6P9F7 803 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 LINGO4Q6UY18 593 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 B3GLCTQ6Y288 498 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CDHR3Q6ZTQ4 885 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 LYSMD3Q7Z3D4 306 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 SLC26A11Q86WA9 606 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CTAGE3PQ8IX95 158 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 KLHDC8BQ8IXV7 354 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 NLGN4XQ8N0W4 816 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 METTL25Q8N6Q8 603 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 PCDH20Q8N6Y1 951 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 ACVR1CQ8NER5 493 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 OR10H4Q8NGA5 316 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 OR5D18Q8NGL1 313 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TRMT10AQ8TBZ6 339 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 PIWIL2Q8TC59 973 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 SLC2A12Q8TD20 617 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ABHD5Q8WTS1 349 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 MYLIPQ8WY64 445 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ST6GALNAC6Q969X2 333 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ESAMQ96AP7 390 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 SLCO4A1Q96BD0 722 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 MMABQ96EY8 250 aaPredicted RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 STAMBPL1Q96FJ0 436 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CERS2Q96G23 380 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ATXN7L3BQ96GX2 97 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 BTN2A3PQ96KV6 586 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 C4orf36Q96KX1 117 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 DUX5Q96PT3 197 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 VPS35Q96QK1 796 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 SIGLEC11Q96RL6 698 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 OLFM1Q99784 485 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 EBNA1BP2Q99848 306 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 CTRCQ99895 268 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 OMDQ99983 421 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TBL1YQ9BQ87 522 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 NAT9Q9BTE0 207 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 FSD1LQ9BXM9 530 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ZYG11BQ9C0D3 744 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 NUAK2Q9H093 628 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 SLC25A32Q9H2D1 315 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 MMP27Q9H306 513 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 GSX1Q9H4S2 264 aaPredicted RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 SOX17Q9H6I2 414 aaPredicted RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 DCLRE1BQ9H816 532 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 NOL11Q9H8H0 719 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 LMAN1LQ9HAT1 526 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 PDFQ9HBH1 243 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 HHATLQ9HCP6 504 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ASCL3Q9NQ33 180 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 FSCN3Q9NQT6 498 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ENTPD7Q9NQZ7 604 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 KLHL1Q9NR64 748 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 MRPL17Q9NRX2 175 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 INIPQ9NRY2 104 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 PLK2Q9NYY3 685 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 KCMF1Q9P0J7 381 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ABCD2Q9UBJ2 740 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 SLC2A6Q9UGQ3 507 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 BCAP29Q9UHQ4 241 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 DNMT3LQ9UJW3 386 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 STOML2Q9UJZ1 356 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 AGO1Q9UL18 857 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 EXO1Q9UQ84 846 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 CCL26Q9Y258 94 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 RASD1Q9Y272 281 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CA5BQ9Y2D0 317 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 YBX2Q9Y2T7 364 aaKnown RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 ZNF281Q9Y2X9 895 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 UBE2J1Q9Y385 318 aaPredicted RBP3.34□□□□□ -1.87
SMG6-208ENST00000570874 NOX1Q9Y5S8 564 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TNFRSF18Q9Y5U5 241 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 HCFC2Q9Y5Z7 792 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 CPQQ9Y646 472 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 USH1CQ9Y6N9 552 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 TMEM131Q92545 1883 aa3.34□□□□□ -1.87
SMG6-208ENST00000570874 ARHGEF17Q96PE2 2063 aaPredicted RBP3.34□□□□□ -1.88
SMG6-208ENST00000570874 C5orf42Q9H799 3197 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms