RNA–Protein interactions for RNA: ENST00000570324.1

NPLOC4-204, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 414 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-204ENST00000570324 OR5M10Q6IEU7 315 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 NOXRED1Q6NXP6 359 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 TMEM107Q6UX40 140 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 FRMD7Q6ZUT3 714 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 SEM1Q6ZVN7 128 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 P4HA3Q7Z4N8 544 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 WDSUB1Q8N9V3 476 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 RELL2Q8NC24 303 aaPredicted RBP8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 NAXEQ8NCW5 288 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 OR7G2Q8NG99 324 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 FAM76AQ8TAV0 307 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 ZPLD1Q8TCW7 415 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 VSTM2LQ96N03 204 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 TM9SF2Q99805 663 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 TXLNGYQ9BZA5 131 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 OR2B2Q9GZK3 357 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 ACBD3Q9H3P7 528 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 PTGES2Q9H7Z7 377 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 C3orf14Q9HBI5 128 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 Q9N2J8 555 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 MYNNQ9NPC7 610 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 DDX18Q9NVP1 670 aaKnown RBP8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 OXSMQ9NWU1 459 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 SIRT5Q9NXA8 310 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 CRIM1Q9NZV1 1036 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 PPP4R1LQ9P1A2 415 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 EMCNQ9ULC0 261 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 ABCA12Q86UK0 2595 aa8.13□□□□□ -1.11
NPLOC4-204ENST00000570324 A0A087WV62 115 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 MBD3L4A6NDZ8 208 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 MBD3L3A6NE82 208 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 MBD3L5A6NJ08 208 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 KDM4EB2RXH2 506 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 UBFD1O14562 309 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 TSPAN2O60636 221 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 PLIN3O60664 434 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 CTAG2O75638 210 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 RSL1D1O76021 490 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 KCNH1O95259 989 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 IL18BPO95998 194 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 SHBGP04278 402 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 KRT4P19013 534 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 GRK2P25098 689 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 TACR1P25103 407 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 DPP4P27487 766 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 SOX18P35713 384 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 ZNF136P52737 540 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 EEF1A1P68104 462 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 STX5Q13190 355 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 GAB1Q13480 694 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 CEBPEQ15744 281 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 CYP27C1Q4G0S4 372 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 DCST1Q5T197 706 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 EEF1A1P5Q5VTE0 462 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 LIPMQ5VYY2 423 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 FAM71E1Q6IPT2 247 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 IKBIPQ70UQ0 350 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 SZRD1Q7Z422 152 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 TRIM46Q7Z4K8 759 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 TDRPQ86YL5 185 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 GRAMD2AQ8IUY3 354 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 HOMEZQ8IX15 550 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 C4orf33Q8N1A6 199 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 MEIOBQ8N635 442 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 EIF1ADQ8N9N8 165 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 OR4N2Q8NGD1 307 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 MBD3L2Q8NHZ7 208 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 MZB1Q8WU39 189 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 FAM222BQ8WU58 562 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 INTS12Q96CB8 462 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 RMND5BQ96G75 393 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 METTL2AQ96IZ6 378 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 ZFP3Q96NJ6 502 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 TUBA1CQ9BQE3 449 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 GPATCH1Q9BRR8 931 aaKnown RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 CLEC4MQ9H2X3 399 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 DSN1Q9H410 356 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 GLIPR2Q9H4G4 154 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 CBLCQ9ULV8 474 aa8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 RPH3AQ9Y2J0 694 aaPredicted RBP8.12□□□□□ -1.11
NPLOC4-204ENST00000570324 TTC36A6NLP5 189 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 CLCA1A8K7I4 914 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 CASKO14936 926 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 AZIN1O14977 448 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 PDPK1O15530 556 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 PEPDP12955 493 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 DDX5P17844 614 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 HK1P19367 917 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 CHMP24386 653 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 DNASE1P24855 282 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 DNAJA1P31689 397 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 GABRA3P34903 492 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 EVI2BP34910 448 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 STARP49675 285 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 PRKAG1P54619 331 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 DIO3P55073 304 aa8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 MANFP55145 182 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 DSCR4P56555 118 aaPredicted RBP8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 EEFSECP57772 596 aaKnown RBP8.11□□□□□ -1.11
NPLOC4-204ENST00000570324 PSG6Q00889 435 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms