RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 HEATR5BQ9P2D3 2071 aa5.04□□□□□ -1.6
SF3B3-213ENST00000569687 TRIOBPQ9H2D6 2365 aa5.04□□□□□ -1.6
SF3B3-213ENST00000569687 A0A1W2PR77 199 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 KRBA1A5PL33 1030 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 M0R082 166 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 P2RX6O15547 441 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 FMO6PO60774 539 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 DNAJB6O75190 326 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CLPXO76031 633 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 OR5F1O95221 314 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 AK1P00568 194 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 STATHP02808 62 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CSF2P04141 144 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 ATP1B1P05026 303 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 ALPPP05187 535 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 SLC35E2P0CK97 266 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 C8orf89P0DMQ9 161 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CTSEP14091 401 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CNR2P34972 360 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 MC3RP41968 323 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CTSKP43235 329 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 MAP2K4P45985 399 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 FASLGP48023 281 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 STARD6P59095 220 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 TUBA1BP68363 451 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 HPCAP84074 193 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CDK5Q00535 292 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 ST3GAL4Q11206 333 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 MAP4K2Q12851 820 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 BIKQ13323 160 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 PIN1Q13526 163 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-213ENST00000569687 GANABQ14697 944 aaKnown RBP5.03□□□□□ -1.6
SF3B3-213ENST00000569687 TRAM2Q15035 370 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 TBCEQ15813 527 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-213ENST00000569687 DECR1Q16698 335 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 ZSWIM7Q19AV6 140 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 PRTGQ2VWP7 1150 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 INAVAQ3KP66 663 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 DEFB134Q4QY38 66 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 GPAT3Q53EU6 434 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 ZNF311Q5JNZ3 666 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 TMEM31Q5JXX7 168 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 PLAG1Q6DJT9 500 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 C19orf48Q6RUI8 117 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 PTCHD4Q6ZW05 846 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 TUBA1AQ71U36 451 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 TRIM73Q86UV7 250 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 COMTD1Q86VU5 262 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 PARGQ86W56 976 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 OOSP2Q86WS3 158 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 MCATQ8IVS2 390 aaKnown RBP5.03□□□□□ -1.6
SF3B3-213ENST00000569687 TAGAPQ8N103 731 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 LINC00528Q8N1L1 170 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 ARL14Q8N4G2 192 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CSNK1A1LQ8N752 337 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CDRT4Q8N9R6 151 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 SLC16A11Q8NCK7 471 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 OR7G2Q8NG99 324 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 OR9Q2Q8NGE9 314 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 OR6T1Q8NGN1 323 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 OR8J1Q8NGP2 316 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 OR52P1PQ8NH57 321 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 FAM81AQ8TBF8 368 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 GNPDA2Q8TDQ7 276 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 ADAMTS15Q8TE58 950 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 SLC37A2Q8TED4 501 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 KAT2AQ92830 837 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 FGF11Q92914 225 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 GTPBP3Q969Y2 492 aaKnown RBP5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CTHRC1Q96CG8 243 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 ZG16BQ96DA0 208 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 LGALS12Q96DT0 336 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 PRRC1Q96M27 445 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 NECAB3Q96P71 396 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-213ENST00000569687 MS4A4EQ96PG1 132 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 FCRL4Q96PJ5 515 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 SDF2Q99470 211 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 COPS4Q9BT78 406 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 GSX2Q9BZM3 304 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 RAB33BQ9H082 229 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 RACGAP1Q9H0H5 632 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 IRF2BPLQ9H1B7 796 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 TCEAL2Q9H3H9 227 aaPredicted RBP5.03□□□□□ -1.6
SF3B3-213ENST00000569687 PIGUQ9H490 435 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 SIAEQ9HAT2 523 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 ANKHQ9HCJ1 492 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 PALMDQ9NP74 551 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 DUSP22Q9NRW4 184 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 RASSF1Q9NS23 344 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 MAN2C1Q9NTJ4 1040 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CLN6Q9NWW5 311 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 IMPAD1Q9NX62 359 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 KLHL28Q9NXS3 571 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 RHCGQ9UBD6 479 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 EPHA6Q9UF33 1036 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 POMT2Q9UKY4 750 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CYP8B1Q9UNU6 501 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 SATB2Q9UPW6 733 aa5.03□□□□□ -1.6
SF3B3-213ENST00000569687 MRPS17Q9Y2R5 130 aaKnown RBP5.03□□□□□ -1.6
SF3B3-213ENST00000569687 CHST2Q9Y4C5 530 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms