RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 CACNA1DQ01668 2161 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 TMEM114B3SHH9 223 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 FAM47E-STBD1D6RA91 191 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 TM9SF1O15321 606 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 BIRC5O15392 142 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 PEX11AO75192 247 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 MAPK1P28482 360 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 HSPB3Q12988 150 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 EIPR1Q53HC9 387 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 WIPI1Q5MNZ9 446 aaPredicted RBP18.5■□□□□ 0.55
CLK3-225ENST00000569063 CEP85LQ5SZL2 805 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 CES4AQ5XG92 561 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 LRIG3Q6UXM1 1119 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 CROCCP2Q86T23 111 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 PM20D2Q8IYS1 436 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 OR10Q1Q8NGQ4 319 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 CLHC1Q8NHS4 586 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 ZFP28Q8NHY6 868 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 EFHD2Q96C19 240 aaPredicted RBP18.5■□□□□ 0.55
CLK3-225ENST00000569063 ZBED6CLQ96FA7 236 aaPredicted RBP18.5■□□□□ 0.55
CLK3-225ENST00000569063 C3orf30Q96M34 536 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 ZIM3Q96PE6 472 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 LMF2Q9BU23 707 aaKnown RBP18.5■□□□□ 0.55
CLK3-225ENST00000569063 PRDM14Q9GZV8 571 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 ENKD1Q9H0I2 346 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 KCNJ16Q9NPI9 418 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 ACSS1Q9NUB1 689 aaPredicted RBP18.5■□□□□ 0.55
CLK3-225ENST00000569063 SH3BP4Q9P0V3 963 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 CBLCQ9ULV8 474 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 MAPRE3Q9UPY8 281 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 SLC6A5Q9Y345 797 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 WIF1Q9Y5W5 379 aa18.5■□□□□ 0.55
CLK3-225ENST00000569063 A0A0G2JNJ9 132 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 TTC36A6NLP5 189 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 TOXO94900 526 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 SNRPB2P08579 225 aaKnown RBP18.49■□□□□ 0.55
CLK3-225ENST00000569063 DHRS4L1P0CG22 281 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 BMP7P18075 431 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 GAS1P54826 345 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 TFF3Q07654 80 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 GAB1Q13480 694 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 ZNHIT3Q15649 155 aaPredicted RBP18.49■□□□□ 0.55
CLK3-225ENST00000569063 ATP6AP1LQ52LC2 224 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 R3HCC1LQ7Z5L2 792 aaKnown RBP18.49■□□□□ 0.55
CLK3-225ENST00000569063 PLCZ1Q86YW0 608 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 HOXB13Q92826 284 aaPredicted RBP18.49■□□□□ 0.55
CLK3-225ENST00000569063 PGM2Q96G03 612 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 PKNOX2Q96KN3 472 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 TREX2Q9BQ50 279 aaPredicted RBP18.49■□□□□ 0.55
CLK3-225ENST00000569063 UCK2Q9BZX2 261 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 Q9N2J8 555 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 SERHLQ9NQF3 203 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 NTMQ9P121 344 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 Q9UFV3 132 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 GIMAP2Q9UG22 337 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 ATP6V1HQ9UI12 483 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 ACTL7BQ9Y614 415 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 CENPEQ02224 2701 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 ITPR2Q14571 2701 aa18.49■□□□□ 0.55
CLK3-225ENST00000569063 ADGRG4Q8IZF6 3080 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 EPPINO95925 133 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 ACTL6AO96019 429 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 PRPS2P11908 318 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 CYP4B1P13584 511 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 DDX5P17844 614 aaKnown RBP18.48■□□□□ 0.55
CLK3-225ENST00000569063 GPC1P35052 558 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 ADH7P40394 386 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 ZFP36L2P47974 494 aaKnown RBP18.48■□□□□ 0.55
CLK3-225ENST00000569063 MANFP55145 182 aaKnown RBP18.48■□□□□ 0.55
CLK3-225ENST00000569063 MLC1Q15049 377 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 DECR1Q16698 335 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 C6orf136Q5SQH8 315 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 RIPPLY2Q5TAB7 128 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 YRDCQ86U90 279 aaKnown RBP18.48■□□□□ 0.55
CLK3-225ENST00000569063 PPP1R14CQ8TAE6 165 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 ABTB1Q969K4 478 aaPredicted RBP18.48■□□□□ 0.55
CLK3-225ENST00000569063 UGT2B28Q9BY64 529 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 TRIM8Q9BZR9 551 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 OR2B2Q9GZK3 357 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 CENPHQ9H3R5 247 aa18.48■□□□□ 0.55
CLK3-225ENST00000569063 MRTO4Q9UKD2 239 aaKnown RBP18.48■□□□□ 0.55
CLK3-225ENST00000569063 MRPS18CQ9Y3D5 142 aaKnown RBP18.48■□□□□ 0.55
CLK3-225ENST00000569063 TEX15Q9BXT5 2789 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 WDR91A4D1P6 747 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 NKX2-6A6NCS4 301 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 FAM90A27PA6NNH2 459 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 SCAMP2O15127 329 aaKnown RBP18.47■□□□□ 0.55
CLK3-225ENST00000569063 ITM2AO43736 263 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 SKAP2O75563 359 aaPredicted RBP18.47■□□□□ 0.55
CLK3-225ENST00000569063 LYPLA1O75608 230 aaPredicted RBP18.47■□□□□ 0.55
CLK3-225ENST00000569063 ZWINTO95229 277 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 HSPA4LO95757 839 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 IL33O95760 270 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 SERPINE1P05121 402 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 GRK2P25098 689 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 EVI2BP34910 448 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 RPL3P39023 403 aaKnown RBP18.47■□□□□ 0.55
CLK3-225ENST00000569063 MAP3K8P41279 467 aa18.47■□□□□ 0.55
CLK3-225ENST00000569063 SF3B4Q15427 424 aaKnown RBP eCLIP18.47■□□□□ 0.552e-6■■■■□ 21.3
CLK3-225ENST00000569063 CHI3L2Q15782 390 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms