RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 GAGE2EQ4V326 116 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 LYSMD4Q5XG99 296 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 GAGE2AQ6NT46 116 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 ARMCX5Q6P1M9 558 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 DLEU7Q6UYE1 221 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 SIGLEC15Q6ZMC9 328 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 ARHGAP22Q7Z5H3 698 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 TAF8Q7Z7C8 310 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 CACUL1Q86Y37 369 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 OTUD6BQ8N6M0 293 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 BMPERQ8N8U9 685 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 OR2T12Q8NG77 320 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 OR2T34Q8NGX1 318 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 OLIG1Q8TAK6 271 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 RNF139Q8WU17 664 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 SELENOMQ8WWX9 145 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 TMEM190Q8WZ59 177 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 PSMG2Q969U7 264 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 ESAMQ96AP7 390 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 MSANTD3Q96H12 275 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 CNOT6LQ96LI5 555 aaKnown RBP2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 FAM20AQ96MK3 541 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 TTC25Q96NG3 672 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 RASL10BQ96S79 203 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 PLIN2Q99541 437 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 CCDC94Q9BW85 323 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 NFKBIZQ9BYH8 718 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 TRIM4Q9C037 500 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 MTMR12Q9C0I1 747 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 GFRA4Q9GZZ7 299 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 DDX47Q9H0S4 455 aaKnown RBP2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 TSPYL1Q9H0U9 437 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 SNX25Q9H3E2 840 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 MAGEF1Q9HAY2 307 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 NPAP1Q9NZP6 1156 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 GAGE2DQ9UEU5 116 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 PTBP2Q9UKA9 531 aaKnown RBP2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 MMP17Q9ULZ9 603 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 FOXA2Q9Y261 457 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 GRIP1Q9Y3R0 1128 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 ASB3Q9Y575 518 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 SLCO1B1Q9Y6L6 691 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 U3KQV3 271 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 FASNP49327 2511 aaKnown RBP2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 F5P12259 2224 aa2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 ASH1LQ9NR48 2969 aaKnown RBP2.97□□□□□ -1.93
HMGB1P6-201ENST00000569046 NYNRINQ9P2P1 1898 aaKnown RBP2.96□□□□□ -1.93
HMGB1P6-201ENST00000569046 FREM2Q5SZK8 3169 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 A0A0B4J203 849 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 A0A1B0GWJ7 208 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 ARHGEF35A5YM69 484 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 PP2D1A8MPX8 630 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 PRSS46E5RG02 174 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 O00370 1275 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 CYB561D2O14569 222 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 LANCL1O43813 399 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 SSX5O60225 188 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 ATP6V1G1O75348 118 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 SPAG6O75602 509 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 ATP6AP2O75787 350 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 DEXIO95424 95 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 LDLRP01130 860 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 IGHV2-70P01814 119 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 KRT6BP04259 564 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 HAPLN1P10915 354 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 GABRG2P18507 467 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 CYP2A7P20853 494 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 CYP2F1P24903 491 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 PIK3R1P27986 724 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 PSMA5P28066 241 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 EPHA2P29317 976 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 PRDX6P30041 224 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 RPL9P32969 192 aaKnown RBP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 HSD17B3P37058 310 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 NAMPTP43490 491 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 CDX1P47902 265 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 KRT6CP48668 564 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 TRPC1P48995 793 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 CNN1P51911 297 aaKnown RBP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 CLDN15P56746 228 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 MAT1AQ00266 395 aaKnown RBP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 OVGP1Q12889 678 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 RIPK1Q13546 671 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 DCAF4L1Q3SXM0 396 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 KCTD21Q4G0X4 260 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 SYT14P1Q58G82 188 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 XKR4Q5GH76 650 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 GCNT6Q5T4J0 391 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 GRTP1Q5TC63 336 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 FAM46CQ5VWP2 391 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 PRAMEF7Q5VXH5 474 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 WSCD1Q658N2 575 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 SULT1C3Q6IMI6 304 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 FAM166AQ6J272 317 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 KLC3Q6P597 504 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 BLOC1S2Q6QNY1 142 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 CCBE1Q6UXH8 406 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 ITIH5Q86UX2 942 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 ANKRD46Q86W74 232 aa2.96□□□□□ -1.94
HMGB1P6-201ENST00000569046 MEX3DQ86XN8 651 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms