RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 MRPL1Q9BYD6 325 aaKnown RBP10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 STMN4Q9H169 189 aaPredicted RBP10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 IPPKQ9H8X2 491 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 FANCFQ9NPI8 374 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 YAE1D1Q9NRH1 226 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 PSME2Q9UL46 239 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 ACOT9Q9Y305 439 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 RNF11Q9Y3C5 154 aa10.61□□□□□ -0.71
GTF3C1-209ENST00000568569 ANK2Q01484 3957 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 CCDC189A1A4V9 331 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 FAM159BA6NKW6 160 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 OVOL3O00110 214 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 PHF1O43189 567 aaPredicted RBP10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 TSPAN2O60636 221 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 CLDN9O95484 217 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 CT45A8P0DMV1 189 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 CT45A9P0DMV2 189 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 PCSK2P16519 638 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 ARL1P40616 181 aaPredicted RBP10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 SUCLG1P53597 346 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 GAS1P54826 345 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 RPS3AP61247 264 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 MRPS22P82650 360 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 MRPS35P82673 323 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 OCRLQ01968 901 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 GANABQ14697 944 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 LTB4RQ15722 352 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 CT45A2Q5DJT8 189 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 GRTP1Q5TC63 336 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 FRG2Q64ET8 278 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 STAC2Q6ZMT1 411 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 CYS1Q717R9 158 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 WFDC8Q8IUA0 241 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 CTAGE3PQ8IX95 158 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 KLHL7Q8IXQ5 586 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 SLC35F6Q8N357 371 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 METTL25Q8N6Q8 603 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 FADS6Q8N9I5 356 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 OR6K3Q8NGY3 331 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 RHEBL1Q8TAI7 183 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 TRPC4APQ8TEL6 797 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 KLHL29Q96CT2 875 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 FRG2BQ96QU4 278 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 TRIM31Q9BZY9 425 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 PPP4R1LQ9P1A2 415 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 EMC9Q9Y3B6 208 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 TNPO3Q9Y5L0 923 aaKnown RBP10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 ZNF780BQ9Y6R6 833 aa10.6□□□□□ -0.71
GTF3C1-209ENST00000568569 A8MV72 311 aaPredicted RBP10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 H3BML4 177 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 BCAS2O75934 225 aaPredicted RBP10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 FAM157CP0CG43 387 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 HK1P19367 917 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 EVI2BP34910 448 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 PNLIPRP2P54317 469 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 CLDN20P56880 219 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 CORO7P57737 925 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 DUSP2Q05923 314 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 SGCBQ16585 318 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 METTL2BQ6P1Q9 378 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 LARP4Q71RC2 724 aaKnown RBP eCLIP10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 COMMD6Q7Z4G1 85 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 CCDC91Q7Z6B0 441 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 METTL4Q8N3J2 472 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 OR2M3Q8NG83 312 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 ZNF675Q8TD23 568 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 KCTD4Q8WVF5 259 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 GTPBP3Q969Y2 492 aaKnown RBP10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 NXNL1Q96CM4 212 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 ERP27Q96DN0 273 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 CNRIP1Q96F85 164 aaPredicted RBP10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 ZBED6CLQ96FA7 236 aaPredicted RBP10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 VSTM2LQ96N03 204 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 CDK15Q96Q40 435 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 ACTR6Q9GZN1 396 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 OR10A4Q9H209 315 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 DSN1Q9H410 356 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 PLSCR4Q9NRQ2 329 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 ZNF337Q9Y3M9 751 aa10.59□□□□□ -0.71
GTF3C1-209ENST00000568569 OR2M5A3KFT3 312 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 C17orf51A8MQB3 221 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 SCO2O43819 266 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 AQP8O94778 261 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 PLGP00747 810 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 SOD3P08294 240 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 TCP1P17987 556 aaKnown RBP10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 ACVR1BP36896 505 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 ALDH9A1P49189 494 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 IFT88Q13099 833 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 FAM83EQ2M2I3 478 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 ERCC6LQ2NKX8 1250 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 ZNF628Q5EBL2 1059 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 TTC19Q6DKK2 380 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 ADAM5Q6NVV9 412 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 FAM180BQ6P0A1 224 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 NPSR1Q6W5P4 371 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 C3orf62Q6ZUJ4 267 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 CENPLQ8N0S6 344 aaPredicted RBP10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 OR52B6Q8NGF0 335 aa10.58□□□□□ -0.72
GTF3C1-209ENST00000568569 OR5M1Q8NGP8 315 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms