RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 OR6C1Q96RD1 312 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 MRPS26Q9BYN8 205 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 CHRNA10Q9GZZ6 450 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 ARRDC1-AS1Q9H2J1 176 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 MTHFD2LQ9H903 347 aaPredicted RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 NECTIN3Q9NQS3 549 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 PAPOLBQ9NRJ5 636 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 RASSF1Q9NS23 344 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 KLHL28Q9NXS3 571 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 NTMQ9P121 344 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 FBXO4Q9UKT5 387 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 LY6G6EA0A0G2JKS1 128 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 CPSF4LA6NMK7 179 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 C17orf105B2RV13 164 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 YKT6O15498 198 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 PRKNO60260 465 aaPredicted RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 DPM1O60762 260 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 UGT2B11O75310 529 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 EPPINO95925 133 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 LGI1O95970 557 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 ANXA8P13928 327 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 FBLP22087 321 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 IDH2P48735 452 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 MAPK10P53779 464 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 HSD17B7P56937 341 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 RGS8P57771 180 aaPredicted RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 TAS2R41P59536 307 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 NPRL3Q12980 569 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 LARS2Q15031 903 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 ARHGAP11BQ3KRB8 267 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 CCDC157Q569K6 752 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 TYW3Q6IPR3 259 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 HEPHL1Q6MZM0 1159 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 PRSS42Q7Z5A4 293 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 KMT5CQ86Y97 462 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 CARFQ8N187 725 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 OR4N2Q8NGD1 307 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 APOBEC4Q8WW27 367 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 CTHRC1Q96CG8 243 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 ZNF501Q96CX3 271 aaPredicted RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 PINK1Q9BXM7 581 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 LRRN3Q9H3W5 708 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 ZNF768Q9H5H4 540 aaKnown RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 CDC14AQ9UNH5 594 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 DTX4Q9Y2E6 619 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 GPR55Q9Y2T6 319 aaPredicted RBP6.58□□□□□ -1.36
SMG1-215ENST00000568239 HCN4Q9Y3Q4 1203 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 U3KQA8 63 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 FER1L5A0AVI2 2057 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 RALGAPA1Q6GYQ0 2036 aa6.58□□□□□ -1.36
SMG1-215ENST00000568239 KNTC1P50748 2209 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 CENPVL1A0A0U1RR11 272 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 VGLL3A8MV65 326 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 PEX12O00623 359 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 SLITRK5O94991 958 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 GASTP01350 101 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 CCNYL3P0C7X3 344 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 SP9P0CG40 484 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 CNR2P34972 360 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 STT3AP46977 705 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 FOXL2P58012 376 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 RPP38P78345 283 aaKnown RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 POU6F2P78424 691 aaPredicted RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 CD47Q08722 323 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 MAP4K2Q12851 820 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 ANGPT1Q15389 498 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 PRAMEF8Q5VWM4 474 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 PRAMEF7Q5VXH5 474 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 FAAH2Q6GMR7 532 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 FAHD1Q6P587 224 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 RABEPKQ7Z6M1 372 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 ZNF605Q86T29 641 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 BPIFB6Q8NFQ5 453 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 OR4C15Q8NGM1 316 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 CNIH3Q8TBE1 160 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 TSLPQ969D9 159 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 OR8D2Q9GZM6 311 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 DUSP22Q9NRW4 184 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 OR10H1Q9Y4A9 318 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 HEMK1Q9Y5R4 338 aaPredicted RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 CLCA3PQ9Y6N3 262 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 IGHV5-10-1A0A0J9YXX1 117 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 A0A1B0GX78 115 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 BLACEA4D250 179 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 PTGES3LE9PB15 166 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 H3BMH7 237 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 AP3D1O14617 1153 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 SLC16A6O15403 523 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 HYAL3O43820 417 aaPredicted RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 TFAP2AP05549 437 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 PNLIPP16233 465 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 PTNP21246 168 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 AGXTP21549 392 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 ELAVL4P26378 380 aaKnown RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 IFNA8P32881 189 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 RPL5P46777 297 aaKnown RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 CLK3P49761 638 aaKnown RBP6.57□□□□□ -1.36
SMG1-215ENST00000568239 PSG6Q00889 435 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 ACY1Q03154 408 aa6.57□□□□□ -1.36
SMG1-215ENST00000568239 TARDBPQ13148 414 aaKnown RBP eCLIP6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms