RNA–Protein interactions for RNA: ENST00000568232.1

CLK3-222, Transcript of CDC like kinase 3, humanhuman

Gene CLK3, Length 958 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-222ENST00000568232 ADAD1Q96M93 576 aaKnown RBP10.48□□□□□ -0.73
CLK3-222ENST00000568232 COL21A1Q96P44 957 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 ADOQ96SZ5 270 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 MTERF1Q99551 399 aaKnown RBP10.48□□□□□ -0.73
CLK3-222ENST00000568232 DESI2Q9BSY9 194 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 PRRG4Q9BZD6 226 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 GRIP2Q9C0E4 1043 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 OR10A4Q9H209 315 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 DSN1Q9H410 356 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 TSPY26PQ9H489 355 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 C12orf49Q9H741 205 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 PLAC1Q9HBJ0 212 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 TRRAPQ9Y4A5 3859 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 DYSFO75923 2080 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 ALPK2Q86TB3 2170 aa10.48□□□□□ -0.73
CLK3-222ENST00000568232 OR2M5A3KFT3 312 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 SHISA9B4DS77 424 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 DLX3O60479 287 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 SS18L1O75177 396 aaPredicted RBP10.47□□□□□ -0.73
CLK3-222ENST00000568232 NME6O75414 186 aaPredicted RBP10.47□□□□□ -0.73
CLK3-222ENST00000568232 REM1O75628 298 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 LY6HO94772 140 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 ADH6P28332 368 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 BSGP35613 385 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 GZMKP49863 264 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 TAS2R39P59534 338 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 IRF9Q00978 393 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 TBCCQ15814 346 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.47□□□□□ -0.73
CLK3-222ENST00000568232 OR52E8Q6IFG1 317 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 MFSD12Q6NUT3 480 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 TTC27Q6P3X3 843 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 FIGNL1Q6PIW4 674 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 CYP20A1Q6UW02 462 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 METTL25Q8N6Q8 603 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 NAT8LQ8N9F0 302 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 RNF214Q8ND24 703 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 STEAP2Q8NFT2 490 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 HUS1BQ8NHY5 278 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 GMPPAQ96IJ6 420 aaPredicted RBP10.47□□□□□ -0.73
CLK3-222ENST00000568232 USB1Q9BQ65 265 aaKnown RBP10.47□□□□□ -0.73
CLK3-222ENST00000568232 BRINP2Q9C0B6 783 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 STMN4Q9H169 189 aaPredicted RBP10.47□□□□□ -0.73
CLK3-222ENST00000568232 CNOT10Q9H9A5 744 aaKnown RBP10.47□□□□□ -0.73
CLK3-222ENST00000568232 WDR41Q9HAD4 459 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 LYARQ9NX58 379 aaKnown RBP10.47□□□□□ -0.73
CLK3-222ENST00000568232 MED11Q9P086 117 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 ZKSCAN5Q9Y2L8 839 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 PLLPQ9Y342 182 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 PSAT1Q9Y617 370 aa10.47□□□□□ -0.73
CLK3-222ENST00000568232 FREM1Q5H8C1 2179 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 OR6C70A6NIJ9 312 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 SHISA8B8ZZ34 492 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 ACOX3O15254 700 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 GCM2O75603 506 aaPredicted RBP10.46□□□□□ -0.73
CLK3-222ENST00000568232 FESP07332 822 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 FCGR2AP12318 317 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 CPMP14384 443 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 DRD5P21918 477 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 EIF1AXP47813 144 aaKnown RBP10.46□□□□□ -0.73
CLK3-222ENST00000568232 CDH11P55287 796 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 RPS3AP61247 264 aaKnown RBP10.46□□□□□ -0.73
CLK3-222ENST00000568232 E2F2Q14209 437 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 GGTLC2Q14390 218 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 RAB35Q15286 201 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 PRICKLE4Q2TBC4 344 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 CR1LQ2VPA4 569 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 SPANXN3Q5MJ09 141 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 C6orf163Q5TEZ5 329 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 AGAP6Q5VW22 663 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 C11orf71Q6IPW1 123 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 TRMT10BQ6PF06 316 aaKnown RBP10.46□□□□□ -0.73
CLK3-222ENST00000568232 TCAIMQ8N3R3 496 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 C3orf56Q8N813 242 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 OR2M3Q8NG83 312 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 OR4K14Q8NGD5 310 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 OR52R1Q8NGF1 315 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 PIWIL2Q8TC59 973 aaKnown RBP10.46□□□□□ -0.73
CLK3-222ENST00000568232 PROX1Q92786 737 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 GFM2Q969S9 779 aaKnown RBP10.46□□□□□ -0.73
CLK3-222ENST00000568232 UBE2E3Q969T4 207 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 C3orf49Q96BT1 292 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 NAP1L3Q99457 506 aaPredicted RBP10.46□□□□□ -0.73
CLK3-222ENST00000568232 DDX31Q9H8H2 851 aaKnown RBP10.46□□□□□ -0.73
CLK3-222ENST00000568232 GRPEL1Q9HAV7 217 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 NGBQ9NPG2 151 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 FANCFQ9NPI8 374 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 SMYD2Q9NRG4 433 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 FAIMQ9NVQ4 179 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 FBXO34Q9NWN3 711 aa10.46□□□□□ -0.73
CLK3-222ENST00000568232 CORO1CQ9ULV4 474 aaPredicted RBP10.46□□□□□ -0.73
CLK3-222ENST00000568232 MALRD1Q5VYJ5 2156 aa10.46□□□□□ -0.74
CLK3-222ENST00000568232 FAM95CA0A1B0GW59 222 aa10.45□□□□□ -0.74
CLK3-222ENST00000568232 EIF1AYO14602 144 aaKnown RBP10.45□□□□□ -0.74
CLK3-222ENST00000568232 SCO2O43819 266 aa10.45□□□□□ -0.74
CLK3-222ENST00000568232 TSPAN2O60636 221 aa10.45□□□□□ -0.74
CLK3-222ENST00000568232 CBX7O95931 251 aa10.45□□□□□ -0.74
CLK3-222ENST00000568232 TGFAP01135 160 aa10.45□□□□□ -0.74
CLK3-222ENST00000568232 OPN1LWP04000 364 aa10.45□□□□□ -0.74
CLK3-222ENST00000568232 PORP16435 677 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms