RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 NAXDQ8IW45 347 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 KRT222Q8N1A0 295 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 CARNMT1Q8N4J0 409 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 C10orf53Q8N6V4 93 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 ANKRD20A12PQ8NF67 263 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 MRAPQ8TCY5 172 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 RAB3CQ96E17 227 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 DHTKD1Q96HY7 919 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 COG3Q96JB2 828 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 GSDMAQ96QA5 445 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 SPAG8Q99932 426 aaPredicted RBP2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 APOL2Q9BQE5 337 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 FUNDC2Q9BWH2 189 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 ZCCHC3Q9NUD5 404 aaKnown RBP2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 ACOXLQ9NUZ1 547 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 QPCTLQ9NXS2 382 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 CFAP45Q9UL16 551 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 RABL2BQ9UNT1 228 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 RNF24Q9Y225 148 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 KLHDC2Q9Y2U9 406 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 NAALAD2Q9Y3Q0 740 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 TEX264Q9Y6I9 313 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 KIF13BQ9NQT8 1826 aa2.89□□□□□ -1.95
HERPUD1-212ENST00000567944 CPDO75976 1380 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 NPC1L1Q9UHC9 1359 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 PLEKHH1Q9ULM0 1364 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 SBF1O95248 1867 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 WDR90Q96KV7 1748 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 SSH2Q76I76 1423 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 A0A1B0GUL7 405 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 TRIM49BA6NDI0 452 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 ZNF487B1APH4 448 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 SAP18O00422 153 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 MCF2LO15068 1137 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 TSC22D2O75157 780 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 GMNNO75496 209 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 SMC2O95347 1197 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 IGKV3-15P01624 115 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 PIGRP01833 764 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 FCGR3AP08637 254 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 TPM1P09493 284 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 HMOX1P09601 288 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 FERP16591 822 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 RPS4XP62701 263 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 ABRAXAS2Q15018 415 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 EXOSC7Q15024 291 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 C14orf28Q4W4Y0 310 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 LIPJQ5W064 366 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 FAM219BQ5XKK7 198 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 B3GLCTQ6Y288 498 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 KIAA1328Q86T90 577 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 SERINC5Q86VE9 423 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 ZNF410Q86VK4 478 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 SLC22A16Q86VW1 577 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 ZNF584Q8IVC4 421 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 ICA1LQ8NDH6 482 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 RHOXF1Q8NHV9 184 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 ST7LQ8TDW4 575 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 GTSF1Q8WW33 167 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 GIMAP1Q8WWP7 306 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 KRT35Q92764 455 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 FRAT1Q92837 279 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 SNX21Q969T3 373 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 RAB39BQ96DA2 213 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 TBC1D31Q96DN5 1066 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 CFAP36Q96G28 342 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 SH3GL1Q99961 368 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 FAM107BQ9H098 131 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 RPAP3Q9H6T3 665 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 ADGRL4Q9HBW9 690 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 RRAGDQ9NQL2 400 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 TAS2R16Q9NYV7 291 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 ZMAT5Q9UDW3 170 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 CTNNA3Q9UI47 895 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 XPO7Q9UIA9 1087 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 MRPS2Q9Y399 296 aaKnown RBP2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 ATG4BQ9Y4P1 393 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 CICQ96RK0 1608 aaPredicted RBP2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 TAF1LQ8IZX4 1826 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 ZBED9Q6R2W3 1325 aa2.88□□□□□ -1.95
HERPUD1-212ENST00000567944 NUP155O75694 1391 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 DHX57Q6P158 1386 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 ADGRB1O14514 1584 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 YTHDC2Q9H6S0 1430 aaKnown RBP2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 A0A0A6YYD4 124 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 TLR4O00206 839 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 SH2D1BO14796 132 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 VEGFDO43915 354 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 BAG2O95816 211 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 IGHV3-9P01782 118 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 FASP25445 335 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 HMGCLP35914 325 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 TNFRSF4P43489 277 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 NDST1P52848 882 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 BLVRAP53004 296 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 IST1P53990 364 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 HMGCS2P54868 508 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 SLC12A3P55017 1021 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 GEMP55040 296 aa2.87□□□□□ -1.95
HERPUD1-212ENST00000567944 NAAAQ02083 359 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms