RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 MYNNQ9NPC7 610 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 MIEF1Q9NQG6 463 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 C1orf109Q9NX04 203 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 ALKBH4Q9NXW9 302 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 KLRF1Q9NZS2 232 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 Q9UFV3 132 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 LGALS13Q9UHV8 139 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 EXO1Q9UQ84 846 aaKnown RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 CCL27Q9Y4X3 112 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 POLR3HQ9Y535 204 aaPredicted RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 WIF1Q9Y5W5 379 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 ABCA12Q86UK0 2595 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 HRNRQ86YZ3 2850 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 PCNX3Q9H6A9 2034 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 ZNF469Q96JG9 3925 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 MED12LQ86YW9 2145 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 ANKRD17O75179 2603 aaKnown RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 TLDC2A0PJX2 215 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 CD8B2A6NJW9 211 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 DVL2O14641 736 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 AZIN1O14977 448 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 LSM1O15116 133 aaKnown RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 NPHS1O60500 1241 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 TBX19O60806 448 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 SEC22BO75396 215 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 REM1O75628 298 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 CBR3O75828 277 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 PSMG1O95456 288 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 EPPINO95925 133 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 JUNP05412 331 aaKnown RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 BMP7P18075 431 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 CAPN3P20807 821 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 ALDH3A1P30838 453 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 CEACAM8P31997 349 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 EVI2BP34910 448 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 TIMP3P35625 211 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 SERPINB5P36952 375 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 ADH7P40394 386 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 PEX19P40855 299 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 MC3RP41968 323 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 SERPINB4P48594 390 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 CORO7P57737 925 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 PSG6Q00889 435 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 TLE4Q04727 773 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 ZNF155Q12901 538 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 ZNHIT3Q15649 155 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 PRSS53Q2L4Q9 553 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 CYP27C1Q4G0S4 372 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 ACSF3Q4G176 576 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 EIPR1Q53HC9 387 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 WIPI1Q5MNZ9 446 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 KANK2Q63ZY3 851 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 NSUN5P2Q63ZY6 315 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 VASNQ6EMK4 673 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 WDR93Q6P2C0 686 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 TMEM107Q6UX40 140 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 NPSR1Q6W5P4 371 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 LARP4Q71RC2 724 aaKnown RBP eCLIP4.36□□□□□ -1.71
CLK3-219ENST00000567805 WDR53Q7Z5U6 358 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 TRABD2AQ86V40 505 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 IFNEQ86WN2 208 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 PLCZ1Q86YW0 608 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 SLC44A2Q8IWA5 706 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 OR2L13Q8N349 312 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 BANPQ8N9N5 519 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 WDSUB1Q8N9V3 476 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 OR2W6PQ8NHA6 318 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 OR14L1PQ8NHC6 308 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 ZPLD1Q8TCW7 415 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 AENQ8WTP8 325 aaKnown RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 RNF138Q8WVD3 245 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 CAVIN3Q969G5 261 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 ABTB1Q969K4 478 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 ELP4Q96EB1 424 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 LRRC46Q96FV0 321 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 ZNF764Q96H86 408 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 WDYHV1Q96HA8 205 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 EGLN2Q96KS0 407 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 FCRL1Q96LA6 429 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 AMDHD1Q96NU7 426 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 FAM111AQ96PZ2 611 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 CCT7Q99832 543 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 GATA5Q9BWX5 397 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 UGT2B28Q9BY64 529 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 OR2B2Q9GZK3 357 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 GLIPR2Q9H4G4 154 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 CALHM2Q9HA72 323 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 LRTM1Q9HBL6 345 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 EML4Q9HC35 981 aaKnown RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 MCCC2Q9HCC0 563 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 SERHLQ9NQF3 203 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 DDX18Q9NVP1 670 aaKnown RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 ZNF629Q9UEG4 869 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 KCNN3Q9UGI6 736 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 MRTO4Q9UKD2 239 aaKnown RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 ABCG2Q9UNQ0 655 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 C19orf53Q9UNZ5 99 aaPredicted RBP4.36□□□□□ -1.71
CLK3-219ENST00000567805 MAPRE3Q9UPY8 281 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 CAMK2AQ9UQM7 478 aa4.36□□□□□ -1.71
CLK3-219ENST00000567805 SLC6A5Q9Y345 797 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms